Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02725 ATGGCAAAAGAACAAATTCAGGTACTAAATGCGCTTGATGTTGCAAAAACACAATGGTACCATTTCACAGCAATCGTCATCGCTGGAATGGGCTTCTTCACCGATGCATATGATCTATTCTGCATATCTCTTGTTACAAAGTTGCTTGGCCGCATATATTACCATGTTGACGGTGCACCAAAGCCCGGTTCATTGCCTCCCAATGTTGCAGCTGCAGTAAATGGTGTGGCTTTCTGTGGAACACTTTCAGGTCAGCTTTTCTTTGGTTGGCTTGGTGATAAGATGGGAAGGAAAAAAGTCTATGGCATGACTCTGATGATGATGGTGATATGTTCCGTCGGTTCCGGCCTTTCATTCGGTCATAGTGCAAAATCTGTAATGGCAACCCTCTGCTTCTTCCGGTTCTGGCTTGGATTTGGCATTGGTGGAGACTATCCACTTTCTGCTACCATAATGTCTGAGTATTCTAACAAGAAGACTCGAGGGGCCTTCATTGCTGCAGTGTTCGCCATGCAGGGTTTTGGCATTTTGGCAGGTGGTATATTTGCAATTATAATTTCAGCTGCATTCAATAGCAGGTATACTGCTCCAGCATATGAGGTTGATCCAGCCGGGTCAACAGTCGTACAAGCAGACTACATTTGGAGGATAATTGTGATGGTGGGAGCACTCCCAGCGGCATTGACTTACTACTGGCGGATGAAGATGCCGGAAACTGCCCGTTATACTGCTCTAGTAGCCAAGAACATGAAGCAGGCAGCAGCAGATATGTCTAAGGTTCTGCAGGTCGAGATTCAAGCTGAACCACAGAGTGAAGATCCGGCAAAGCCCAAGCCTTATGGCTTGTTCTCAAAGGAGTTCCTCACTCGCCATGGACTGCATCTGCTTGGTACATCAAGCACTTGGTTCTTGCTTGATATTGCGTTTTACAGTCAAAATCTTTTCCAGAAGGACATCTTCAGTGCAATTGGTTGGATACCTCCAGCCAAAACCATGAATGCTATTGAGGAGGTTTACAAAATTGCAAGGGCTCAAACACTCATTGCTCTCTGCAGTACAGTTCCTGGCTACTGGTTCACGGTAGCTTTCATTGACAAGATAGGAAGATTTGCTATCCAATTGATGGGCTTCTTC 1134 0.4559 MAKEQIQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAPKPGSLPPNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMMMVICSVGSGLSFGHSAKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISAAFNSRYTAPAYEVDPAGSTVVQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNMKQAAADMSKVLQVEIQAEPQSEDPAKPKPYGLFSKEFLTRHGLHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02725 378 CDD MFS_PhT 25 378 - -
Vimu6g02725 378 SUPERFAMILY MFS general substrate transporter 12 377 IPR036259 -
Vimu6g02725 378 Pfam Sugar (and other) transporter 25 378 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu6g02725 378 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 378 - -
Vimu6g02725 378 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 378 IPR020846 GO:0022857
Vimu6g02725 378 Gene3D MFS general substrate transporter like domains 20 378 IPR036259 -
Vimu6g02725 378 FunFam Inorganic phosphate transporter 1-6 20 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02725 Vimu-Chr6 23769933 23772530 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02725 1 378 Inorganic Solute Cotransporters AT2G38940 82.677 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02725 K08176 - gmx:100819445 679.478