Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02719 ATGGCAAAGGAGCAAATTGAGGTACTAAATGCGCTTGATGTTGCAAAAACACAATGGTACCATTTCACAGCAATCGTCATCGCTGGAATGGGCTTCTTCACCGATGCATATGATCTATTCTGCATATCTCTTGTTACAAAGTTGCTTGGCCGCATATATTACCATGTTGACGGTGCACCAAAGCCCGGTTCATTGCCTCCCAATGTTGCAGCTGCAGTAAATGGTGTGGCTTTCTGTGGAACACTTTCAGGTCAGCTTTTCTTTGGTTGGCTTGGTGATAAGATGGGAAGGAAAAAAGTCTATGGCATGACTCTGATGATGATGGTGATATGTTCCGTCGGTTCCGGCCTTTCATTCGGTCATAGTGCAAAATCTGTAATGGCAACCCTCTGCTTCTTCCGGTTCTGGCTTGGATTTGGCATTGGTGGAGACTATCCACTTTCTGCTACCATAATGTCTGAGTATTCTAACAAGAAGACTCGAGGGGCCTTCATTGCTGCAGTGTTCGCCATGCAGGGTTTTGGCATTTTGGCAGGTGGTATATTTGCAATTATAATTTCAGCTGCATTCAATAGCAGGTATACTGCTCCAGCATATGAGGTTGATCCAGCCGGGTCAACAGTCGTACAAGCAGACTACATTTGGAGGATAATTGTGATGGTGGGAGCACTCCCAGCGGCATTGACTTACTACTGGCGGATGAAGATGCCGGAAACTGCCCGTTATACTGCTCTAGTAGCCAAGAACATGAAGCAGGCAGCAGCAGATATGTCTAAGGTTCTGCAGGTCGAGATTCAAGCTGAACCACAGAGTGAAGATCCGGCAAAGCCCAAGCCTTATGGCTTGTTCTCAAAGGAGTTCCTCACTCGCCATGGACTGCATCTGCTTGGTACATCAAGCACTTGGTTCTTGCTTGATATTGCGTTTTACAGTCAAAATCTTTTCCAGAAGGACATCTTCAGTGCAATTGGTTGGATACCTCCAGCCAAAACCATGAATGCTATTGAGGAGGTTTACAAAATTGCAAGGGCTCAAACACTCATTGCTCTCTGCAGTACAGTTCCTGGCTACTGGTTCACGGTGGCTTTCATTGACAAGATAGGAAGATTTGCTATCCAATTGATGGGCTTCTTC 1134 0.4586 MAKEQIEVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAPKPGSLPPNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMMMVICSVGSGLSFGHSAKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISAAFNSRYTAPAYEVDPAGSTVVQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNMKQAAADMSKVLQVEIQAEPQSEDPAKPKPYGLFSKEFLTRHGLHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02719 378 CDD MFS_PhT 25 378 - -
Vimu6g02719 378 Pfam Sugar (and other) transporter 25 378 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu6g02719 378 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 378 - -
Vimu6g02719 378 SUPERFAMILY MFS general substrate transporter 11 377 IPR036259 -
Vimu6g02719 378 Gene3D MFS general substrate transporter like domains 20 378 IPR036259 -
Vimu6g02719 378 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 378 IPR020846 GO:0022857
Vimu6g02719 378 FunFam Inorganic phosphate transporter 1-6 20 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02719 Vimu-Chr6 23746992 23749587 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02719 1 378 Inorganic Solute Cotransporters AT2G38940 82.415 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02719 K08176 - gmx:100819445 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02719 6 23746992 23749587 Vimu6g02719 6 23746992 23749587 ECH
Vimu6g02719 6 23746992 23749587 Vimu3g00111 3 854531 856472 PCT
Vimu3g01313 3 23515088 23517154 Vimu6g02719 6 23746992 23749587 PCT