Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g02665 | ATGAAGAAGATCAAGAACCAAATGAAAATACAGTTTTTCATCTTCTTTTGCTACATTGGTTGTTCCTCATATGGTTTTTCTGCTGCTGTAAATGATGAAGTATCGACTTTGCTTTCCATGAAAGCAGGTCTCATTGATCCATTGAACACTCTTCGGGATTGGAAACTGCATGACAAAGCACCGGTAAAGGATGCATTTCATTGTAGCTGGACTGGCATCAAATGCAACTCAGCTGGAGCCGTAGAGGAGCTTGATCTGTCCCACAAGAATCTCAGTGGTACAGTATCCGATGTTATACAGAGACTTAAAAGTCTTACCTCTCTCAACTTGTGTTGCAATGCTTTTTCATCACCATTGCCAAAATCCTTAGCCAATCTCACCACACTTAACAAACTTGATGTCAGCCAAAATTTCTTCAATGGTGACTTTCCATTAGGCCTTGGAAGAGCATGGAGACTGATGACCTTAAATGCATCCAGCAATGAATTCTCAGGTTCTCTTCCTGAGGATCTTGGAAATGCCTCTTCCTTAGAGATGCTTGATCTCAGAGGCAGTTTTTTTGAAGGGTCAGTTCCAAAATCGTTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCAGGGAACAATCTCACTGGTAAAATTCCTGGAGAGCTGGGACAACTTTCATCACTGGAGTTTATGATCCTTGGATATAATGAATTTGAAGGTGTCATTCCAGAAGAGTTTGGCAACCTCACCAATCTTAAGTATCTTGATTTAGCAGTGGCCAATCTTGGTGGTGAGATTCCAAGTGTATTAGGAAAGCTCAAGTTATTGAATACGGTTTTCTTTTACAACAACAATTTTGAAGACAGAATTCCAGCAGCAATTGGCAATATGACTTCTTTGCAGTTGCTGGATCTTTCTGATAACATGTTGTCAGGAAAAATTCCGGCTGAAATAAGTCAGCTGAAGAATTTAAAACTTCTGAACTTGATGGGCAACCAGTTGTCTGGTCCTGTGCCTTCCGGCTTTGGAGATTTGCCACAGCTGGAGGTACTTGAGCTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGTAACCTTGGCAAGAATTCACCATTGCAATGGTTAGATGTGTCATCCAATTCACTCTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAGGGCAATCTCACCAAGCTTATACTATTCAACAATGCTTTCTCTGGTCCAATTCCATCAAGCCTATCAACGTGCTTTTCACTTGTACGTGTTCGAATTCACAACAATTTTCTTTCAGGGACAATTCCTGTGGGTCTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCTAACAATAGTCTTTCTGGTGGAATTCCTGATGACATTGCTTCTTCCACATCCCTTTCCTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCCTCCACCGTCCTTTCCATTCCAAACCTGCAAGCTTTCATGGTCTCCAACAACAACTTGGAAGGAGAAATCCCAGACCAATTCCAGGACTGTCCATCACTTGCAGTTCTTGATCTCTCATCAAATCATTTATCTGGAAGCATTCCCGCAAGCATTGCTTCTTGTCAGAAGTTGGTAAATTTGAACCTCCAAAACAACCAATTGACTGGTGAAATCCCAAAATCATTAGCTAAGATGCCTTCATTGGCCATGGTTGACCTTTCCAACAATTCTCTGACAGGACAAATACCTGAAAGCTTTGGAATTTCTCCAGCTCTTGAAGCACTCAATGTCTCATACAATAAGCTAGAAGGCCCAGTCCCAGCGAACGGAATACTAAGAACTGTAAACCCAAATGACCTTGTCGGTAATGTTGGCCTATGTGGTGGTGTCCTCCCTCCATGTGACCAAAACTCTGCATACTCTTCAAGGGAACGGAGCTTGCGCACAAAGCATATGATTACAGCATGGATCACTGGAATATCATCAATCCTAGTTATTGGGATAGCGATTGTGGTTGCTAGATCTTTGTACATAAGATGGTACACTGATGGGTTTTGCTTCCGAGAAAGATTTTACAAGGGTAGCAAAGGATGGCCCTGGAGATTGATGGCATTTCAGAGGCTTGGTTTTACTAGTACTGAGATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGAATGGGAGCCACTGGGATTGTTTATAAGGCTGAGGTACCGCAATCAAACACAGTTGTGGCAGTGAAAAAATTGTGGAGAACAGGAACTGATATTGAAGTTGGAAGTAGTGATGACCTTGTGGGGGAGGTGAATCTTTTGGGGAGACTAAGGCATAGAAACATTGTTAGACTATTAGGATTTCTTCATAATGACATTGATGTAATGATAGTTTATGAATTCATGCACAATGGCAACCTAGGAGAAGCCTTGCACGGTAGACAAGCAACAAGATTGCTTGTAGACTGGGTTTCACGGTACAACATAGCTCTAGGAGTTGCTCAAGGACTTGCTTATCTTCATCATGACTGTCATCCTCCCGTTATTCATCGAGACATCAAGTCAAACAATATATTGCTTGATGCAAATCTTGAGGCACGGATAGCAGATTTTGGTTTGGCCAAGATGATGATCCAGAAGAATGAAACAGTCTCCATGGTAGCGGGATCTTATGGTTATATTGCCCCTGAATATGGATATGCCTTGAAGGTAGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTTTTGTTGGAGCTTCTCACGGGAAAGAGACCTTTAGATCCAGACTTTGGAGAGTCAATAGACATTGTAGAGTGGATTAGAATGAAGATTAGAGACAACAAATCACTGGAAGAAGCATTAGACCCCAGTGTAGGAAATAGCAGGCATGTTGTAGAAGAGATGCTTTTAGTTCTAAGAATAGCAATTCTGTGCACTGCCAAGCTCCCCAAGGACAGACCAACCATGAGGGATGTCATTATGATGCTTGGAGAGGCTAAGCCTCGAAGAAAGAGCAGTGGCAATGATGCAGCTAACAACAAAGAGTCACCAGTTTTTAGCACATCACCAGTTAATGGCCTAATGTAG | 3063 | 0.4192 | MKKIKNQMKIQFFIFFCYIGCSSYGFSAAVNDEVSTLLSMKAGLIDPLNTLRDWKLHDKAPVKDAFHCSWTGIKCNSAGAVEELDLSHKNLSGTVSDVIQRLKSLTSLNLCCNAFSSPLPKSLANLTTLNKLDVSQNFFNGDFPLGLGRAWRLMTLNASSNEFSGSLPEDLGNASSLEMLDLRGSFFEGSVPKSFSNLHKLKFLGLSGNNLTGKIPGELGQLSSLEFMILGYNEFEGVIPEEFGNLTNLKYLDLAVANLGGEIPSVLGKLKLLNTVFFYNNNFEDRIPAAIGNMTSLQLLDLSDNMLSGKIPAEISQLKNLKLLNLMGNQLSGPVPSGFGDLPQLEVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSLSGEIPETLCSQGNLTKLILFNNAFSGPIPSSLSTCFSLVRVRIHNNFLSGTIPVGLGKLGKLQRLELANNSLSGGIPDDIASSTSLSFIDLSRNKLHSSLPSTVLSIPNLQAFMVSNNNLEGEIPDQFQDCPSLAVLDLSSNHLSGSIPASIASCQKLVNLNLQNNQLTGEIPKSLAKMPSLAMVDLSNNSLTGQIPESFGISPALEALNVSYNKLEGPVPANGILRTVNPNDLVGNVGLCGGVLPPCDQNSAYSSRERSLRTKHMITAWITGISSILVIGIAIVVARSLYIRWYTDGFCFRERFYKGSKGWPWRLMAFQRLGFTSTEILACIKETNVIGMGATGIVYKAEVPQSNTVVAVKKLWRTGTDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLHNDIDVMIVYEFMHNGNLGEALHGRQATRLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIQKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDPDFGESIDIVEWIRMKIRDNKSLEEALDPSVGNSRHVVEEMLLVLRIAILCTAKLPKDRPTMRDVIMMLGEAKPRRKSSGNDAANNKESPVFSTSPVNGLM | 1020 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g02665 | 1020 | ProSitePatterns | Protein kinases ATP-binding region signature. | 718 | 742 | IPR017441 | GO:0005524 | |
Vimu6g02665 | 1020 | Pfam | Leucine rich repeat | 487 | 547 | IPR001611 | GO:0005515 | |
Vimu6g02665 | 1020 | Pfam | Leucine rich repeat | 280 | 331 | IPR001611 | GO:0005515 | |
Vimu6g02665 | 1020 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 839 | 851 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu6g02665 | 1020 | Gene3D | Ribonuclease Inhibitor | 300 | 389 | IPR032675 | - | |
Vimu6g02665 | 1020 | MobiDBLite | consensus disorder prediction | 1002 | 1020 | - | - | |
Vimu6g02665 | 1020 | Gene3D | Phosphorylase Kinase; domain 1 | 712 | 796 | - | - | |
Vimu6g02665 | 1020 | Pfam | Leucine rich repeat N-terminal domain | 31 | 76 | IPR013210 | - | |
Vimu6g02665 | 1020 | Gene3D | Ribonuclease Inhibitor | 390 | 631 | IPR032675 | - | |
Vimu6g02665 | 1020 | ProSiteProfiles | Protein kinase domain profile. | 712 | 1011 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g02665 | 1020 | Pfam | Protein kinase domain | 714 | 984 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g02665 | 1020 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 287 | 370 | - | - | |
Vimu6g02665 | 1020 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 371 | 631 | - | - | |
Vimu6g02665 | 1020 | FunFam | MDIS1-interacting receptor like kinase 1 | 712 | 796 | - | - | |
Vimu6g02665 | 1020 | Gene3D | Ribonuclease Inhibitor | 185 | 290 | IPR032675 | - | |
Vimu6g02665 | 1020 | MobiDBLite | consensus disorder prediction | 992 | 1020 | - | - | |
Vimu6g02665 | 1020 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 186 | 286 | - | - | |
Vimu6g02665 | 1020 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 30 | 185 | - | - | |
Vimu6g02665 | 1020 | SMART | LRR_typ_2 | 342 | 366 | IPR003591 | - | |
Vimu6g02665 | 1020 | SMART | LRR_typ_2 | 438 | 462 | IPR003591 | - | |
Vimu6g02665 | 1020 | SMART | LRR_typ_2 | 198 | 222 | IPR003591 | - | |
Vimu6g02665 | 1020 | SMART | LRR_typ_2 | 510 | 534 | IPR003591 | - | |
Vimu6g02665 | 1020 | SMART | LRR_typ_2 | 102 | 125 | IPR003591 | - | |
Vimu6g02665 | 1020 | SMART | LRR_typ_2 | 294 | 318 | IPR003591 | - | |
Vimu6g02665 | 1020 | SMART | LRR_typ_2 | 558 | 582 | IPR003591 | - | |
Vimu6g02665 | 1020 | SMART | LRR_typ_2 | 486 | 509 | IPR003591 | - | |
Vimu6g02665 | 1020 | SMART | LRR_typ_2 | 246 | 270 | IPR003591 | - | |
Vimu6g02665 | 1020 | SMART | serkin_6 | 712 | 1011 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g02665 | 1020 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 392 | 988 | - | - | |
Vimu6g02665 | 1020 | FunFam | MDIS1-interacting receptor like kinase 1 | 797 | 1007 | - | - | |
Vimu6g02665 | 1020 | Gene3D | Ribonuclease Inhibitor | 28 | 184 | IPR032675 | - | |
Vimu6g02665 | 1020 | SUPERFAMILY | Protein kinase-like (PK-like) | 707 | 988 | IPR011009 | - | |
Vimu6g02665 | 1020 | SUPERFAMILY | L domain-like | 30 | 308 | - | - | |
Vimu6g02665 | 1020 | Gene3D | Transferase(Phosphotransferase) domain 1 | 797 | 1013 | - | - | |
Vimu6g02665 | 1020 | SUPERFAMILY | RNI-like | 287 | 597 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g02665 | Vimu-Chr6 | 23315290 | 23318571 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g02665 | 11 | 1020 | Receptor kinase-like Gene Family | AT1G08590 | 60.350 | 0.0 | 1183 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vimu6g02665 | Pkinase | 6.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g02665 | - | - | gmx:100811284 | 1818.51 |