Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02664 ATGGAATCCGAATCCAAAATTCAACTCTTTTTCCTCACCCTTTTCCTCTTCACTCTCCCCCTCATCAACGCAGAAACGCTTCGAACTTACATAGTTCAGCTACATCCTCATGGGATCACCGGCTCTTCTTTCACCTCCAAGCTCAAATGGCACCTTTCATTCATCCAGCAAACCCTTTCCTCCGATGACGACCCTTCTTCTCGCCTTCTCTACTCTTACCGTTCCGCCATGGACGGTTTTGCAGCTCAGTTAACCGAGTCTGAGCTTGAGTACCTCAAGAACTTGCCTGATGTTATCTCAATTAGGCCCGATAGCATGCTCCCGCTGCAGACCACTTACTCTTACAAGTTCTTGGGACTGAACCCTGCTAGAGAAAATGGTTGGTACCAATCCGGTTTCGGCCGTGGAACCATAATTGGGGTGCTTGATACTGGAGTTTGGCCTGAGAGTCCCAGCTTCAATGATCAAGGAATGCCTCCAGTTCCCAAGAAATGGAAGGGTATATGCCAAGCTGGGAAGGCCTTTAACTCTTCCAATTGTAACAGGAAACTTATTGGTGCAAGGTACTTCACCAAAGGCCATTCTTCAGTGTCACCTTTTAGAATTCCGGAATATCTCTCTCCAAGAGACTCCTCCGGACATGGTACACACACTTCGTCCACTGCTGGAGGAGTGCCTGTGCCTTTGGCGAGTGTGTTTGGTTACGCCTCTGGCGTGGCAAGAGGAATGGCTCCTGGTGCCCACATTGCGGTGTACAAAGTCTGCTGGTTCAATGGCTGCTATAACTCAGACATCATGGCTGCAATGGATGTGGCAATCAGAGATGGGGTGGACATTCTCTCCTTGTCTCTAGGTGGCTTCTCTACGCCTCTATATGATGATAACATTGCCATTGGAAGCTTTAGAGCAATGGAGCATGGGATTTCGGTGATATGTGCAGCGGGAAACAATGGTCCTACGGCAATGTCTGTTGCCAATGAGGCTCCTTGGATTGCCACCATCGGTGCAAGCACACTAGACAGGAAATTCCCAGCCACAGTTCGCATGGGAAATGGACAAATGCTCTATGGAGAGTCCATGTACCCTCTGAACCATCCAATGAGCAATGGAAAAGAACTTGAACTGGTTTATCTGTCTGAAGGGGACACCGAGAGTCAATTTTGCCTCAGAGGGTCTCTTCCAAGGGACAAAGTTAAAGGCAAAATGGTGGTATGCGATCGAGGCGTGAACGGAAGAGCAGAGAAGGGACAAGTGGTGAAGGAGGCTGGTGGTGTTGCTATGATCCTCGCCAACACGGAGATAAACTTGGGAGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACTTTGATTGGATTTGATGAAGCAGTTACCTTGAAAGATTACATAAACTCCACAAGAAGGCCTCTTGCAAGGATTGAATTTGGAGGAACTGTGATAGGGAAGTCTAGAGCTCCAGCAGTGGCAAGATTTTCAGCTAGAGGACCAAGTTATACAAACCCTTCAATCCTCAAACCAGATGTTATAGCTCCAGGAGTGAACATCATTGCTGCATGGCCTCAGAATCTTGGTCCTACAGGCCTTCCAGAAGATTCTAGAAGAGTTAACTTCTCAGTCATGTCTGGTACCTCAATGGCATGCCCTCATGTTAGTGGAATTGCTGCTCTCATTCGCTCGGCTCACCCGAGTTGGAGCCCTGCAGCCATCAAATCTGCAATCATGACAACAGCCGAGGTAACCGACCACACCGGAAGGCCTATTCTTGATGAAAACCAACCAGCAGGAGTTTTTGACATGGGAGCTGGACATGTGAATCCACAGAGAGCATTGAACCCTGGACTTGTGTATGACATCAGGCCAGATGATTATATCATCCACCTTTGCAGCCTTGGATACACAAAGTCAGAAATATTCAGCATCACACACAGAAATGTGAGTTGCAATGGAGTCTTGAAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCATTCTCAGTGATATTTAAGGCTGGGGAGAGGAGAAAGATGTTCATCAGGAGACTAACAAATGTGGGAAATGCAAACTCCATCTACTCAGTGGAGGTTAAGGCACCTGAGGGAGTAAAAGTAATAGTAAAACCCAAGCGGCTTGTATTTAAGCAAGTGAATCAAAGCTTGGCTTACAGGGTATGGTTTATATCGAGAAAAAGGGTTAAAAAAGGTGACGGTTTGGTGACCTATGCAGAAGGGAATTTGACATGGGTACACTCCCAAAATGGTTCCAACAGGGTCAGAAGCCCTGTGGCAGTCACTTGGAAGTCAAAGTAG 2307 0.472 MESESKIQLFFLTLFLFTLPLINAETLRTYIVQLHPHGITGSSFTSKLKWHLSFIQQTLSSDDDPSSRLLYSYRSAMDGFAAQLTESELEYLKNLPDVISIRPDSMLPLQTTYSYKFLGLNPARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPVPKKWKGICQAGKAFNSSNCNRKLIGARYFTKGHSSVSPFRIPEYLSPRDSSGHGTHTSSTAGGVPVPLASVFGYASGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDILSLSLGGFSTPLYDDNIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTLDRKFPATVRMGNGQMLYGESMYPLNHPMSNGKELELVYLSEGDTESQFCLRGSLPRDKVKGKMVVCDRGVNGRAEKGQVVKEAGGVAMILANTEINLGEDSVDVHVLPATLIGFDEAVTLKDYINSTRRPLARIEFGGTVIGKSRAPAVARFSARGPSYTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMACPHVSGIAALIRSAHPSWSPAAIKSAIMTTAEVTDHTGRPILDENQPAGVFDMGAGHVNPQRALNPGLVYDIRPDDYIIHLCSLGYTKSEIFSITHRNVSCNGVLKMNRGFSLNYPSFSVIFKAGERRKMFIRRLTNVGNANSIYSVEVKAPEGVKVIVKPKRLVFKQVNQSLAYRVWFISRKRVKKGDGLVTYAEGNLTWVHSQNGSNRVRSPVAVTWKSK 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02664 768 Pfam Peptidase inhibitor I9 29 108 IPR010259 -
Vimu6g02664 768 Gene3D - 340 480 - -
Vimu6g02664 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 110 IPR037045 -
Vimu6g02664 768 ProSiteProfiles Serine proteases, subtilase domain profile. 112 610 - -
Vimu6g02664 768 FunFam Subtilisin-like protease SBT1.5 136 351 - -
Vimu6g02664 768 Gene3D - 627 765 - -
Vimu6g02664 768 Pfam Fibronectin type-III domain 659 763 IPR041469 -
Vimu6g02664 768 FunFam Subtilisin-like protease SBT1.9 20 110 - -
Vimu6g02664 768 CDD PA_subtilisin_like 346 473 - -
Vimu6g02664 768 Pfam PA domain 374 457 IPR003137 -
Vimu6g02664 768 SUPERFAMILY Subtilisin-like 109 614 IPR036852 GO:0004252|GO:0006508
Vimu6g02664 768 CDD Peptidases_S8_3 109 577 IPR034197 -
Vimu6g02664 768 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Vimu6g02664 768 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Vimu6g02664 768 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Vimu6g02664 768 Gene3D Peptidase S8/S53 domain 136 623 IPR036852 GO:0004252|GO:0006508
Vimu6g02664 768 FunFam subtilisin-like protease SBT1.5 340 480 - -
Vimu6g02664 768 SUPERFAMILY PA domain 350 458 IPR046450 -
Vimu6g02664 768 Pfam Subtilase family 134 592 IPR000209 GO:0006508|GO:0008236
Vimu6g02664 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Vimu6g02664 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 63 763 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02664 Vimu-Chr6 23306064 23308370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02664 10 767 Subtilisin-like Serine Gene Family AT1G04110 67.013 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02664 - - gmx:100790205 1428.69