Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g02616 | ATGACGTCGTTCTTAAAGCCCGAGAATGCTCTCAAAAGGGCGGAAGAGTTAATCAATGTTGGGCAGAAGCAGGATGCTCTACAGACTCTTCATGACCTCATTACTTCAAAGAGATACAGAGCATGGCAGAAGACACTTGAAAGGATTATGTTTAAGTATGTTGAACTTTGTGTTGACATGCGCAAAGGCCGGTTTGCAAAAGATGGGCTTATTCAGTATAGAATAATATGTCAACAAGTGAATGTTAGTTCACTGGAGGAGGTGATCAAACACTTTATGCACCTGTCAACTGAGAAAGCTGAACAAGCTCGGAGTCAAGCACAAGCATTAGAAGAAGCCCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCAGAGGACTTGATGTTGAGTTATGTCAGTGGTGAGAAAGGAAAGGACAGATCTGATCGGGAGCTTGTCACCCCATGGTTTAAATTTCTTTGGGAAACTTACAGGACAGTGCTTGAGATATTGCGGAACAACTCAAAACTGGAAGCATTATACGCTATGACAGCTCATCGAGCTTTCCAGTTCTGTAAGCAATATAAACGAACAACAGAGTTCCGCAGACTGTGTGAAATCATAAGAAACCATTTGGCTAATCTCAACAAATACCGTGACCAACGAGACAGGCCCGACCTTTCAGCTCCTGAAAGCTTACAACTGTATCTTGATACTAGAGTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTCTGGCAGGAAGCCTTCAGATCAGTAGAGGATATTCATGGACTGATGTGCCTGGTCAAGAAAACTCCCAAGCCATCCTTGATGGTTGTTTACTATGTGAAGCTGACAGAAATATTTTGGATATCGTCAAGTCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTATTGCAGAAAAGCTTCAATAAGAATCTGAGTCAGAAGGATTTGCAACTAATAGCTTCATCCGTTGTTCTTGCTGCACTTTCAGTGCCTCCTCATGACCGTACACACGGTGCGTCTCATTTGGAACTGGAGCATGAAAAAGAGAGAAATTTGAGAATGGCCAATCTCATTGGCTTCAATCTTGAGAGTAAACCTGAAAGCAGAGAAATGCTCTCAAGATCATCACTTCTTGCTGAACTGTTCATACTGGCTTCAATTGCAAGCCTGCTGTATTGCATAGGGTATATTGATGATGTATTTTGGAAGTTGAGTGGACTCTGGGCATCCAAGGGAGTGATGTCTTGTGTGACTCAGGAAGTGAAAGATGTTTACCATCTTTTGGAACATGAATTTCATCCCTCAGATCTTGCATTAAAAGCGCTGCCCTTGATAACTAAAATCTCAAAGTTAGGGGGGAAGCTTTCTACAGCTTCTTCTGTTCCAGAAGTACAGTTGTCTCAATATGTCCCATCACTGGAAAGACTAGCTACCATGAGGTTACTGCAGCAGGTGTCCAATGTTTATCAGACAATAAAGATTGAGACTTTATCTGGGATGATCCCGTTCTTTGACTTCTCTGTAGTTGAAAAGATCGCCGTAGATGCTGTAAAGCAGAAGTTTGTATCGATGAAAGTTGATCACATGAAAAATGTTGTGATCTTTTCCAAAACGAGTCTCGAGTCAGATGGCTTAAGGGATCACTTGGCCAATTTTGCTGAACAATTAAACAAGGCCCGACAAATGATTTATCCTCCTGATAGGAAACCATCTAAACTTGGTGCCTTACTTCCAACTTTGACAGAGGTTGTTGCCAAAGAACACAAGAGGCTTCTTGCCCGAAAATCAATCATTGAGAAGCGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGAGAGGAGGAGTCAAAAAGACTAAGACTTCAGAAAATAACTGAAGAAGCAGAACAAAGACGGCTTGCCACCGAGTATGAGCAGAGGAAAAATCAGAGGATCCTCAGGGAGATAGAAGAGAGGGAAATTGAAGAAGCCCAAGCTTTACTTCAGGAAGCTGAAAAGCGTATTAAAAAGAAGGGGAAAAAGCCAATTATAGAGGGAGACAAAATGACCAAGCAGACCTTGATGGAGTTAACTTTGACTGAACAACTCCGGGAAAGACAGGAAATGGAAAAGAAGTTGCAGAAGTTAGCGAAAACAATGGATTATTTGGAAAGAGCAAAAAGAGAGGAGGCTGCTCCCCTTATTGAAGCTGCGTATCAACAACGTTTAGTGGAAGAGAGGCTTCTTCATGAGCGTGAACAACAGCAAGAAGTTGAACTGAGCAAACAGAGGCATGAGGGAGATCTCAAGGAGAAGGAGAGGCTTGCTCGAATGATTGGCAATAAGGAGATATATCAGGTCCGAGTTGTTAGTCATCGCCAAGCAGAGTTTAATAGATTAAGAAGAGAACGGGAAGAGAGAATCTCTAGGATTTTGCAGTCAAGGAAACAGGAAAGGGAAAAGATGAGGAAGTTGAAGTATTATCTCAAATTAGAAGAAGAGAGACAACAAAAGTTGCGTGAGGAGGAGGAAGCACGGAAACGTGAAGAGGCGGAAAGGAGAAAGAAGGAAGAGGCTGAACGTTTAGCGAAACTGGCCGAGATAGCTGAAAAACAGAGGCAGAGAGAGCGGGAACTCGAAGAAAAGGAGAGACAAAGAAAAGAAGCATTGTTAGGCAGAGCTGTTGAACCAGCTCCTCCTGCGCGTCAATCGGAACCCGTAACAGCTCCTGCTGCTGCAGCTCCAAACCCAGGGAAATACGTGCCTAAGTTCATGCGAGATAGAGCTGAAAGAACAGGCACTGCTCCTCCTCCGGAAACAGATCGCTGGGGTAACAGTAGCAGCAGGCCGGATGGTGACAGGTGGCGTGGTGATGATCGACGAAGTAGTTATGTTAGTGGTGGAGGTTCGAGGTCATCATCTTCTTGGTCCAGGAATCCGCGTTGA | 2931 | 0.4343 | MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRVEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLESKPESREMLSRSSLLAELFILASIASLLYCIGYIDDVFWKLSGLWASKGVMSCVTQEVKDVYHLLEHEFHPSDLALKALPLITKISKLGGKLSTASSVPEVQLSQYVPSLERLATMRLLQQVSNVYQTIKIETLSGMIPFFDFSVVEKIAVDAVKQKFVSMKVDHMKNVVIFSKTSLESDGLRDHLANFAEQLNKARQMIYPPDRKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREIEEAQALLQEAEKRIKKKGKKPIIEGDKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEREQQQEVELSKQRHEGDLKEKERLARMIGNKEIYQVRVVSHRQAEFNRLRREREERISRILQSRKQEREKMRKLKYYLKLEEERQQKLREEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKERQRKEALLGRAVEPAPPARQSEPVTAPAAAAPNPGKYVPKFMRDRAERTGTAPPPETDRWGNSSSRPDGDRWRGDDRRSSYVSGGGSRSSSSWSRNPR | 976 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g02616 | 976 | MobiDBLite | consensus disorder prediction | 830 | 886 | - | - | |
Vimu6g02616 | 976 | ProSiteProfiles | PCI domain profile. | 316 | 540 | IPR000717 | - | |
Vimu6g02616 | 976 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 1 | 957 | IPR027512 | GO:0005852 | |
Vimu6g02616 | 976 | Coils | Coil | 823 | 884 | - | - | |
Vimu6g02616 | 976 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 1 | 969 | IPR027512 | GO:0005852 | |
Vimu6g02616 | 976 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 217 | 268 | - | - | |
Vimu6g02616 | 976 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 468 | 559 | IPR000717 | - | |
Vimu6g02616 | 976 | Gene3D | - | 269 | 342 | - | - | |
Vimu6g02616 | 976 | Gene3D | - | 407 | 535 | - | - | |
Vimu6g02616 | 976 | Pfam | PCI domain | 414 | 537 | IPR000717 | - | |
Vimu6g02616 | 976 | Coils | Coil | 588 | 629 | - | - | |
Vimu6g02616 | 976 | MobiDBLite | consensus disorder prediction | 830 | 976 | - | - | |
Vimu6g02616 | 976 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 268 | 342 | - | - | |
Vimu6g02616 | 976 | MobiDBLite | consensus disorder prediction | 960 | 976 | - | - | |
Vimu6g02616 | 976 | Coils | Coil | 694 | 724 | - | - | |
Vimu6g02616 | 976 | MobiDBLite | consensus disorder prediction | 941 | 956 | - | - | |
Vimu6g02616 | 976 | Coils | Coil | 642 | 676 | - | - | |
Vimu6g02616 | 976 | Coils | Coil | 93 | 120 | - | - | |
Vimu6g02616 | 976 | Gene3D | UVR domain | 217 | 268 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g02616 | 1 | 976 | Eukaryotic Initiation Factors Gene Family | AT4G11420 | 70.829 | 0.0 | 1325 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g02616 | K03254 | - | gmx:100782598 | 1437.94 |