Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02610 ATGGCTTGTTGTCAACAAAAACTGTTTCACAAACTGAAGCCATTCATAGGTGTAGTTTTCTTGCAGTTTGGATATTCTGGTATGGATATTCTATCCAAGGCTGCACTCAACAGGGGAATGAGTAACTATGTATTTGTTGTGTACCGTCATGTTTTTGCCTTTGTTGTCATGGCCCCTTTTGCAGAAAGTGAGGCCGAAGATGACGTTTTCAATCTTTATGAAGATAGTGATTCTCAGCCTGCTAGATACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTTCTCCCTGCCATTACCTTTGTCATGGCTTGGATTCTCAGGCTTGAGAAGATAAAATTAAAAAGCACACGCAGTCAAGCAAAGGTGGTGGGAACTTTAGCAACTGTTGCAGGTGCCATGATCATGACACTGATCAAGGGTCCAATACTCGATCTTTTTGGAACACACGCCAGCAATACAAGCAACGTGCAAAATGGTGGGATAAATCTTGAACATGCAATAAAGGGATCATTGCGCATGTTTCATGATTCTCCAAGTGAGTTATCATCATCATCATCTATCGCTGCTATTACCATTGAAGCTTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGTTTATTGGGAACCGTTGAAGGTGGCATAGTGGCACTGGTTATGGAAAGGAATAATTTTTCAGCTTGGTCTCTGAAATGGGATACGAAATTGCTTGCTGCTGTCTACAGTGTAGGAATGGCTTATTACATCCAAGGAGTGGTGATGAAAGATAGAGGTCCGGTCTTTGTGACAACTTTTAACCCTCTCTGCATGGTCATTGTGGCTATCATGGGCTCCTTCTTTCTAGCAGAACAAATGTACCTTGGAAGGGCAATTGGTGCTATCGTGATTATTGTAGGACTGTATCTGGTGGTGTGGGGTAAAAGCAAAGACTACGAGTCATCAAGTACGACTACTGAAGAGAATATGTTGTCAGCCAAACAAACAGTAGAAAAGAGCAACATCAAAGAAGAACATTTGAGTAACTTAGGCACCATAGCACGAGATGAACAAGATGGAGAGAATGAGGAAGAGATTGAAAGGAGTGAGAAAATTTGGTTTTCTTCAAGATCTCCGAGACGTCCAAGTTTCTTCGCAATTCAAGCCAAGTGGGTGCAAACGAAGCAGAACGTGGTGTTGTGCAATGTCATGCTAATCGATGTTGAACCCTGTTAA 1215 0.4222 MACCQQKLFHKLKPFIGVVFLQFGYSGMDILSKAALNRGMSNYVFVVYRHVFAFVVMAPFAESEAEDDVFNLYEDSDSQPARYTTATFAVSMYNVLPAITFVMAWILRLEKIKLKSTRSQAKVVGTLATVAGAMIMTLIKGPILDLFGTHASNTSNVQNGGINLEHAIKGSLRMFHDSPSELSSSSSIAAITIEAYPAELSLTAWICLLGTVEGGIVALVMERNNFSAWSLKWDTKLLAAVYSVGMAYYIQGVVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEQMYLGRAIGAIVIIVGLYLVVWGKSKDYESSSTTTEENMLSAKQTVEKSNIKEEHLSNLGTIARDEQDGENEEEIERSEKIWFSSRSPRRPSFFAIQAKWVQTKQNVVLCNVMLIDVEPC 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02610 404 PANTHER WAT1-RELATED PROTEIN 13 316 IPR030184 GO:0016020|GO:0022857
Vimu6g02610 404 Pfam EamA-like transporter family 193 305 IPR000620 GO:0016020
Vimu6g02610 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 210 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02610 Vimu-Chr6 22710622 22714529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02610 5 341 Nodulin-like Gene Family AT2G37460 52.473 1.95e-119 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02610 - - vra:106757633 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02610 6 22710622 22714529 Vimu6g02610 6 22710622 22714529 ECH
Vimu6g02610 6 22710622 22714529 Vimu3g01379 3 25961356 25964217 PCT