Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02599 ATGGAGCTGATTAAGAGACATTTGTGGTGTCCCTACCAATTGAGCCAGCTCAAATGTCTATGTGGGCTAGAGTTTCCAATATTGCTGATTGGGTGTCATGACTTATGGGCAAACGTCCAACTAGTCAAGTTTGGTGTTGAGACTTGGCTAGGTCGGTGCATGGTGCCAAGATTTGGGAAATTTTCAAAGTGTTGGTTTTTGAGATTTGATGGTTGGAATGCACTCTTTATATCACCAAATGGCTACACTAAAAATCTTGGTGCAAGAAATTTTTCATTTTGGTTGGTTTTCAAGCTAGCCAAGTTTGGTGGTGAGACTTGGCTTGGTCGGTGCATGGTGCCAAGATTTGGGAAATTTTCAAAGTGTTGGTTTTTGAGATTTGATGGCTTTGGAGCCTACGTGGCGAAACGAGAGATGAGCACGTGTCGTGTAGCATGGACGGAGCATCACACTCCTATTCTACTCTTAGTAGTTCCCCGCGCAGAGGGTGAGGCCTCCGGAAGCAAGCAGGTTCATAGACGTAGAAAACTTCAGAGTTTTCCCTCTGATTCTGGTTCTTGCAGTGATGGGGTTGCGGATGAAGATTCAGGTGCGTTTTCTAGTAAAGAAGAATCGGAGAAATTGACTATCGGATCATTTCAATTGGGGTTCGGGTCCTCGAAGCAACCGTTTGGAACTCCCATGAAGAAGCTATTAGCTGAAGAACTGTCCCGAGAAACTGAACCCAAAAGAAGAGCTCCCGGTGTCATAGGCAGATTAATGGGTCTTGATGGACTTCCGTTGCAATTGCCTGCTAATAAGCATCACAAGCATGTATCAGAAAATAATGTGAAAGGGACAACACCGGCAGCGAAAACTCGAAGCAGTGGTAAACTATACGGAAGTCGAACATCTGGAAGAAGTTCAAAGAATCAACAAGAGTTTAAGGATGTGTTTGAGGTCTCAGAGATCTCAAACATAGAGGGTTGTAGGTATTCATCCCAGGGGTCTGTAAAGTTGAAGATCACTGATGATGAAATGTCATTTGTTGAACAGAAATTCATGGATGCCAAACTCCGTGCAACTTATCAGGATTTATCGTCTTCCCAGGATTCCCATGATACACTCGAGATTCTAGACTCTAACAACGATCTTTTGCAAAAATATTTTAAGCGGCCAGATTCTTTGTTTAAAAGGCATCTAGATGATCAGCAAGGTTCCCCATCCGAATCACATTTTGATCACATCAAAGGTACCAAATCATCAGATATAGAAAACTATGAACATGGTGACTTAAGCCCGAAGCCGGGTAGGGAGATAAAAGGGTTGAATTACAATAGATCTCATCAGAAGCATCGTGATGGTTATTCTTCCCGTGTAATCAGAAAACAGGATACTCGTAGTTCGCCAAAATCATCAAAGCTTCAGTTTCGGGGAAGAGGTGAACCTGATGCAGTCCCAACAAGGATTGTTATCCTAAAACCTAATCTTGGAAAAGTGCAGAAAGCTACCAAAATTGATTCACCACCTTGTTCTTCACGTACTTCTCTGTTGGATTATGGAAAGTATCCTAAATTTTCAGATAGCAGATTTAGGGACGCTGAACTGAATCAAAGGATAAATTTGCCTGATAATGCCTGGCATTCAAGGCAAAATTCATTGGAATCAAGAGAAATTGCAAAGGAAATCACAAGCCAAATGAAAAATAATTTGAGTAATGGCTCCATGTTATTATCAACTTCTAGATTTAGAGGAAATACGTGGGACAATGGCTCATGTAGTTTTTCTGGGAATGAATCTCTTGAGGAATCAGAGGTGACACCTGTAACTCTGGGAAACCCATTTTACGTAAGTAATACTATCAGCCCATCATCATGTTTTAGTGAATCATTTGTGAGTAAAGAGGCAAAGAAGAGATTGTCAGAGAGGTGGAAAATGTCACTCAAGTCTCAGCAGGGTCATTCTGTATCCAGGAGTGGCACACTAGCTGAAATGCTTGCGACCCCTGATAAGGAAATGAAAACAGCTCATTTTGACAGCAGCCCTAGTGGGGGTTTACGTGATAAAGTTTCTAGCAGTGGTAAACCTGCTGGGTGGGTTGAACCATTGGGTATTAGCAGTAGGGATGGATGGAAGGATGGATGTGTTGGAAGTTTACCAAGGTCTAAGTCTCTTCCTGCTTCATCTACTACTTCCTTCGGAAGTCCTAGAACAATTTTGTGCCACGAAGCTCTTCACGATGATCGATTTATGGTGCCAAAGGTAGCCTCTAAACGGGAAAGGAAGAAAGTGGTGAAATGTCTTGAACAGAGACAGTGTATGAATACGAGAAACCTAAAAAGCAAGAAGTCTCGGTGTTCTCATCCATCAAATCTAGAAGGCAATGAGTCATCCCCAGACTTGAATACAATTCAAAATAAAGTGAGGCTTAATCTTGAAGAGGATTTGCCGAAGCAAGTAATGTTGGCCGCTGAATCATTAGCCGAGATCGATGGAGAAACTATTGCAGTTACTGAAGCTATTGTGAATGTGGCAGATGAAAATGCAGTTGTTTCATCTGAATCTTATATTAAGGATTTATCAGTTGGGTCTTCCGCTAAAAATTCTGTCCCCTTGCAAACACCTGTATCTGGACTTGAATCTTCATGCTGTAAAGATGCGGATCAACCCAGTCCAGTCTCAGTGCTAGAACCTTCTTTTACTGATGATCTGTCATCATGTTCCGAGTGTTTTGAAAGTCTCAGTGTTGACATACAAGGGCTTCGGATGCAACTTCAGTTGCTGAAGCTAGAATCTGAAGAATTTGAAGAAGGATCCGTGCTAATTCAAAGTGATGAAGATGGTGGGGAAGCATACACAGGAATTTCAGAAGACAATGGATTACTTAATGGAGATAGCTGGGAGTCTTCCTACGTGATTGATGTCTTGTCTGAATCTGGAATTGATAGAGCTTTACCTGATGCATTTTTGGAAGTTTGGCATTCTCTTGAATGCCCTGTTAGTCTTTCAGTGTTTGATGAGCTTGAAAAGAAGTACTCTGATTGGAGTACTTGCCCACGGTCCGAAAGGAGATTGCTTTTTGATCGTATAAATTGGGGAATTATCGACATATACGATCAATTCGTTAGTGCACAATCATGGGTAATCCCTTCGAGAGCCACAAATCTTTGTTCTAGTGCGAAATTGATTAAAAGTGGAGTCCAAGACTGTTTGTACAAGATGCTGTGGAGTCAGGGAAAAGTAAAGGATACGACACTGGGGAAGGTGTTGGTTAGTGAATTGCAGTGGTTGAACTTAAGAGATGACATTGATGGAATAGGTAGCAAAGTTGAGAGCTTGCTACTTGATGATCTAGTGGCAGAGATAGCTGTTACATAG 3357 0.4182 MELIKRHLWCPYQLSQLKCLCGLEFPILLIGCHDLWANVQLVKFGVETWLGRCMVPRFGKFSKCWFLRFDGWNALFISPNGYTKNLGARNFSFWLVFKLAKFGGETWLGRCMVPRFGKFSKCWFLRFDGFGAYVAKREMSTCRVAWTEHHTPILLLVVPRAEGEASGSKQVHRRRKLQSFPSDSGSCSDGVADEDSGAFSSKEESEKLTIGSFQLGFGSSKQPFGTPMKKLLAEELSRETEPKRRAPGVIGRLMGLDGLPLQLPANKHHKHVSENNVKGTTPAAKTRSSGKLYGSRTSGRSSKNQQEFKDVFEVSEISNIEGCRYSSQGSVKLKITDDEMSFVEQKFMDAKLRATYQDLSSSQDSHDTLEILDSNNDLLQKYFKRPDSLFKRHLDDQQGSPSESHFDHIKGTKSSDIENYEHGDLSPKPGREIKGLNYNRSHQKHRDGYSSRVIRKQDTRSSPKSSKLQFRGRGEPDAVPTRIVILKPNLGKVQKATKIDSPPCSSRTSLLDYGKYPKFSDSRFRDAELNQRINLPDNAWHSRQNSLESREIAKEITSQMKNNLSNGSMLLSTSRFRGNTWDNGSCSFSGNESLEESEVTPVTLGNPFYVSNTISPSSCFSESFVSKEAKKRLSERWKMSLKSQQGHSVSRSGTLAEMLATPDKEMKTAHFDSSPSGGLRDKVSSSGKPAGWVEPLGISSRDGWKDGCVGSLPRSKSLPASSTTSFGSPRTILCHEALHDDRFMVPKVASKRERKKVVKCLEQRQCMNTRNLKSKKSRCSHPSNLEGNESSPDLNTIQNKVRLNLEEDLPKQVMLAAESLAEIDGETIAVTEAIVNVADENAVVSSESYIKDLSVGSSAKNSVPLQTPVSGLESSCCKDADQPSPVSVLEPSFTDDLSSCSECFESLSVDIQGLRMQLQLLKLESEEFEEGSVLIQSDEDGGEAYTGISEDNGLLNGDSWESSYVIDVLSESGIDRALPDAFLEVWHSLECPVSLSVFDELEKKYSDWSTCPRSERRLLFDRINWGIIDIYDQFVSAQSWVIPSRATNLCSSAKLIKSGVQDCLYKMLWSQGKVKDTTLGKVLVSELQWLNLRDDIDGIGSKVESLLLDDLVAEIAVT 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02599 1118 MobiDBLite consensus disorder prediction 666 694 - -
Vimu6g02599 1118 MobiDBLite consensus disorder prediction 166 203 - -
Vimu6g02599 1118 Pfam Protein of unknown function (DUF3741) 344 388 IPR022212 -
Vimu6g02599 1118 MobiDBLite consensus disorder prediction 772 794 - -
Vimu6g02599 1118 MobiDBLite consensus disorder prediction 392 462 - -
Vimu6g02599 1118 PANTHER AFADIN 167 1116 - -
Vimu6g02599 1118 MobiDBLite consensus disorder prediction 276 305 - -
Vimu6g02599 1118 MobiDBLite consensus disorder prediction 269 305 - -
Vimu6g02599 1118 Pfam Domain of unknown function (DUF4378) 962 1114 IPR025486 -
Vimu6g02599 1118 Pfam DUF761-associated sequence motif 240 260 IPR032795 -
Vimu6g02599 1118 MobiDBLite consensus disorder prediction 392 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02599 Vimu-Chr6 22584301 22593128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02599 223 1117 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 35.263 1.49e-122 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02599 - - pvu:PHAVU_001G171300g 1590.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02599 6 22584301 22593128 Vimu3g01406 3 26696550 26701854 PCT