Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02597 ATGAGAAAGCTGTGTTTTAACCCCAAGACGCCGTCGTTTGCCTTGGCCCGCAATTCTCCTTCTTCGCCACAATCTTTAATCTCAAGCCCTACACCGCCCAGGCTCAGCTTTTCAGAACCTGGCAGCGTCGTCGACGAAGATACCTTCATGGAGGAAGCAGAGGCAATCATACTCAAATGGAACCCTGACTCCTCTGCCTACGCCAAAGTCACTTCCCTATTTTATGAAGACAAATCGGAAGCCAAACACTACATTAACTGCGTTAACCAGCTTCACCAAACCATGCATTCCTTGATCTCTCACAGCCCTTCCTCTCATAAACTCGTCCTCGCTCACAACCTAATGCAGATCGCCATGAAAAGACTCAAGAAAGAGTTCTACCAGATCTTATGCATGAACCGCGCTCACCTTGACCCCGAATCGGTCTCCGCCAGATCCTCTCGCACCTCCGCCAATTCTAGTTCCTCCGATTGCGACGACGACTTCGCCGCCGAAGACGACGATATCCGTGTCGCCGGCGACTCTATCACCGAAGTCGAGCAGGTTTCCTCAGGCGCCATGGCGGATCTGAAATTAATTGCCGACTGCATGGTCTCTTCCGGCTACGCAAAGGAGTGCGTCAGCGTTTACATCATCATCCGAAAATCCATAATCGACGAAGGAATTTATCGCCTCGGTGTTGAGAAACTGAGCTCGTCGCGCACTAACAAGATGGATTGGGAAGTGCTTGATTTGAAAATCAAAAGTTGGTTGGAGGCGGTGAGGATTGCCGTTAGAACGCTGTTTAACGGAGAGAGAATCCTCTGCGACAACGTCTTCAGTTACTCGGATTCCGTAAGAGAATCCTGCTTCGCCGAGATTTCCAGAGACGGTGCCTCTCTCCTTTTCGGATTCCCCGAACTCGTTGCCAAAACAAAGAAATCGTCGCCGGAGAAGCTGTTCCGCGTGCTCGACATGTACGCTGTGGCTTCAGAACTGTTGCCGGAGATCGAGTCCATATTTTCCTCCGATTACAACTCCGCCGTGCGTTCTCAGGTCCTCACTTCACTTCAACGACTCACCGAGTCTGCGCAATTCTTGCTCACTGAGTTCGAGTCCACGATGCAAAAAGACTCTTCCAAGACTGCGGTGAACGGCGGCGGCGTGCACTCGCTCACGATTCAGACAATGAATTATCTCGCAATCCTTGCAGATTACGTCAACGTTCTCTCTGACATATTCCCGCGCGAGTGGCTTCCTCTGCCGAAGTCTTCTTCGCTTCCGGAGTCTTATTTATACAGTCCAGAGTCTGATTACTCAGCGTCGATGCCGGCGCTGACGGTGCGCATGGCGTGGCTCATTCTCGTCCTCCTTTGCAAGCTCGATGGCAAAGCGAAGCATTGCAAGGACGTTTCACTATCTTACTTGTTTCTCGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATTACGAAGCACGAAGCTAAAGCGAAGAGGTTTGTGGCGAACTACGAGAAGATAGCTTGGGGAGAAGTGGCTTCATCGCTGCCGGAAAATCCGGCCGCAGCGGAGGCGAGGGCGGTGTTCGAGAACTTCAACCTCAAATTCGAGGTAGCATATCGAAAGCAGAACTCGTTTGTGGTAGCTGATAGAGAACTGCGAGACGAAATAAAAGGTTCGATCGCGAGAAGTATTGTGCCAAGATATCGAGAGTGGTATAATGCGCTGCTTGCTTCGGTGGGATCAGTGAGGGACTTGACGGTGAGGGAGATTGTGACGTTTACCCCACAAGACATTGAAAATTACCTCGCTAACCTCTTCTTTTTTGGAACGTCATCCAGTTCTGTATCCTCCTCGTCGGTAACTTCGTCCCCTCTCCGGCGTTGGAGTTGA 1911 0.5118 MRKLCFNPKTPSFALARNSPSSPQSLISSPTPPRLSFSEPGSVVDEDTFMEEAEAIILKWNPDSSAYAKVTSLFYEDKSEAKHYINCVNQLHQTMHSLISHSPSSHKLVLAHNLMQIAMKRLKKEFYQILCMNRAHLDPESVSARSSRTSANSSSSDCDDDFAAEDDDIRVAGDSITEVEQVSSGAMADLKLIADCMVSSGYAKECVSVYIIIRKSIIDEGIYRLGVEKLSSSRTNKMDWEVLDLKIKSWLEAVRIAVRTLFNGERILCDNVFSYSDSVRESCFAEISRDGASLLFGFPELVAKTKKSSPEKLFRVLDMYAVASELLPEIESIFSSDYNSAVRSQVLTSLQRLTESAQFLLTEFESTMQKDSSKTAVNGGGVHSLTIQTMNYLAILADYVNVLSDIFPREWLPLPKSSSLPESYLYSPESDYSASMPALTVRMAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWITKHEAKAKRFVANYEKIAWGEVASSLPENPAAAEARAVFENFNLKFEVAYRKQNSFVVADRELRDEIKGSIARSIVPRYREWYNALLASVGSVRDLTVREIVTFTPQDIENYLANLFFFGTSSSSVSSSSVTSSPLRRWS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02597 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 46 613 IPR004140 GO:0000145|GO:0006887
Vimu6g02597 636 Pfam Exo70 exocyst complex subunit 248 610 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu6g02597 636 MobiDBLite consensus disorder prediction 142 162 - -
Vimu6g02597 636 MobiDBLite consensus disorder prediction 17 36 - -
Vimu6g02597 636 Gene3D Exocyst complex component Exo70 64 621 - -
Vimu6g02597 636 MobiDBLite consensus disorder prediction 142 158 - -
Vimu6g02597 636 MobiDBLite consensus disorder prediction 17 41 - -
Vimu6g02597 636 SUPERFAMILY Cullin repeat-like 48 613 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02597 Vimu-Chr6 22560479 22562899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02597 50 613 EXO70 exocyst subunit family AT3G09520 54.957 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02597 K07195 - gmx:100810548 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02597 6 22560479 22562899 Vimu3g00575 3 5889407 5902261 PCT