Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02576 ATGCATAGTGTGTTAGATGTTCGGCCTCCTGCATTAACTTCCGTATCTGAACCACTCCCATTTTTTGATGGAACCACAAGGTTGTACATTTGCTATCTGTGCCCTTATGCACAACGTGCATGGATAACTAGGAACTGCAAGGGACTGCAAGACAAGATCGAATTGGTTCCTATTGACCTCAAAAATAGGCCTTCTTGGTATGAGGAGAAAGTGTACCCTCTTAATAAGGTGCCATCGTTGGAGCACAATGGCAAGGTTTTAGGAGAAAGTCTTGATTTGATCAGATATATAGATGCCAACTTTGAAGGGCCATCTCTGTTTCCAAGTGATCCTGCCAAGAGAGAATTTGGAGAGCAAATGATATCCCATGTTGATACGTTCACCAGTGGCGTATATTCTTCATATAAAGGAGATCCTGTACAACAAACCGGTGCTGCTTTTGATTACTTGGAGAATGCTCTTGGTAAATTTGATGATGGACCATTCTTTCTTGGCCAATTTAGTTTGGCGGATATTGCCTATGTTTCATTTATTGAAAGGATCCAATTGGTTTTTTCTGAAATTTTTGAGCACGACATCACAGCAGGAAGACCAAAACTAGCCACATGGATTCAGGAGGCTAATAAGATTGAGGGATATAAGCAGACAAAAGTAGACAAGGAGGAGTATTTGGAAGCTTTCAAGATAAAGTCTGGTTTTGTTGAGATTGAATCTGGGGAGGTGCTTCTTCCACTTCTTATTCTGCAACTCACAGGAATGGAATTCCTTCCTCTCGGCGTGCAAGAAGCTCGTATTCCCCCGCTAACGTCCGTTTCCGAGCCACCTCCTCTTTTCGACGGAACCACCAGGTTGTATATCAGTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCGCTCGGAACTACAAGGGACTACAGGACAAGATCGAACTGGTTCCTATTGATCTTCAAAACAGACCTGCCTGGTATAAGGAGAAAGTCTACCCAGAAAACAAGGTGCCATCATTGGAGCACAATGGGAAGGTCTTGGGAGAAAGTCTCGATTTGGTCAAATACGTAGATGTCAACTTCGAAGGTCCATCTCTGGTTCCCAGTGATCCTGCCAAGAAAGAATTTGGTGAGCAGTTGATTTCTTATGTTGATACTTTCACCAAAGAGCTGTATTCTGCATTGAAAGGAGATCCAATACAACAAGCCAGTCCTGCTTTTGATTACTTGGAGAATTCTCTTGGTAAATTTGATGATGGGCCATTTTTTCTTGGTCAATTTAGCTGGGTGGATATTGCCTATGTTCCATTTGTTGAAAGATTCCAGCTTGTCTTTTTCGAGGTGTTCAAACATGACATAACTGAAGGAAGACCTAAACTTGCAGCGTGGATTGAGGAAGTGAACAGGATTAATGCGTATACACAAACAAGAGGCGATCCTAAGGATATTGTTGATTTTTTCAAGAAACGGATTTTGGTACTGCTCAACAGTAAAAGCCAGAACAGAGAGTCATCATCTAAGATGTAG 1515 0.4211 MHSVLDVRPPALTSVSEPLPFFDGTTRLYICYLCPYAQRAWITRNCKGLQDKIELVPIDLKNRPSWYEEKVYPLNKVPSLEHNGKVLGESLDLIRYIDANFEGPSLFPSDPAKREFGEQMISHVDTFTSGVYSSYKGDPVQQTGAAFDYLENALGKFDDGPFFLGQFSLADIAYVSFIERIQLVFSEIFEHDITAGRPKLATWIQEANKIEGYKQTKVDKEEYLEAFKIKSGFVEIESGEVLLPLLILQLTGMEFLPLGVQEARIPPLTSVSEPPPLFDGTTRLYISYICPYAQRVWIARNYKGLQDKIELVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYVDVNFEGPSLVPSDPAKKEFGEQLISYVDTFTKELYSALKGDPIQQASPAFDYLENSLGKFDDGPFFLGQFSWVDIAYVPFVERFQLVFFEVFKHDITEGRPKLAAWIEEVNRINAYTQTRGDPKDIVDFFKKRILVLLNSKSQNRESSSKM 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02576 504 SFLD Glutathione Transferase (cytosolic) 283 465 IPR040079 -
Vimu6g02576 504 SFLD Glutathione Transferase (cytosolic) 27 207 IPR040079 -
Vimu6g02576 504 SFLD Main (cytGST) 283 465 - -
Vimu6g02576 504 SFLD Main (cytGST) 27 207 - -
Vimu6g02576 504 CDD GST_C_Lambda 110 228 - -
Vimu6g02576 504 Pfam Glutathione S-transferase, N-terminal domain 28 104 IPR004045 -
Vimu6g02576 504 Pfam Glutathione S-transferase, N-terminal domain 284 360 IPR004045 -
Vimu6g02576 504 PANTHER GLUTATHIONE S-TRANSFERASE L1 260 487 IPR044629 GO:0004364
Vimu6g02576 504 FunFam Lambda class glutathione S-transferase 359 490 - -
Vimu6g02576 504 SUPERFAMILY GST C-terminal domain-like 357 486 IPR036282 -
Vimu6g02576 504 FunFam Glutathione S-transferase L2, chloroplastic 256 358 - -
Vimu6g02576 504 SUPERFAMILY GST C-terminal domain-like 101 229 IPR036282 -
Vimu6g02576 504 Gene3D Glutaredoxin 1 102 - -
Vimu6g02576 504 Gene3D Glutaredoxin 258 358 - -
Vimu6g02576 504 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 24 105 IPR004045 -
Vimu6g02576 504 FunFam Glutathione S-transferase L2, chloroplastic 1 102 - -
Vimu6g02576 504 CDD GST_C_Lambda 366 484 - -
Vimu6g02576 504 FunFam Lambda class glutathione S-transferase 103 233 - -
Vimu6g02576 504 SUPERFAMILY Thioredoxin-like 19 106 IPR036249 -
Vimu6g02576 504 Gene3D - 359 491 - -
Vimu6g02576 504 Gene3D - 103 233 - -
Vimu6g02576 504 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 280 361 IPR004045 -
Vimu6g02576 504 Pfam Glutathione S-transferase, C-terminal domain 140 205 - -
Vimu6g02576 504 Pfam Glutathione S-transferase, C-terminal domain 397 461 - -
Vimu6g02576 504 SUPERFAMILY Thioredoxin-like 275 361 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02576 Vimu-Chr6 22384885 22393260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02576 262 488 Glutathione S-transferase Gene Family AT5G02790 67.841 1.91e-115 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02576 K00799 - gmx:100793025 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02576 6 22384885 22393260 Vimu3g01172 3 19787179 19789365 PCT