Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g02551 | TTGCCAGATTCTTTTAGAGTGGAGTATCTTGTCCTGGATGAATCGGATAAGCTTTTTGAGCCAGAATTATTCAAGCAGATTGATTCTGTTCTCAAGGCATGCTCCAACCCCTCAATTATTCGCTCGCTTTTCAGTGCTACTTTACCTGATTTTGTTGAAGTTCGCGCTCGAGAACTTATGCATGATGCTGTTCGTGTAATTGTTGGCAGGAAGAATATGGCTTCTGAAACGATAAAGCAAAAACTGATTTTTACTGGAAGTGAAGAAGGAAAACTTCTTGCAATTCGTCAAAGTTTTGCAGAGAGTCTAAATCCTCCAGTATTGGTCTTTCTCCAAAGCAAGGAACGAGCCAAGGAGTTGTACGGTGAACTTGCATTTGACAACATTAGAGTTGATGTCATTCATTCTGATTTGTCTGAACAAGAGCGAGGAAATGCTGTCGACAACTTCAGAGCTGGAAAAACATGGGTTTTGATTGCTACTGATGTGGTTGCACGGGGCATGGATTTCAAAGGAGTGAACTGTGTGATCAATTATGATTTCCCTGATTCTGCCTCCGCATACGTCCACAGAATTGGTCGTTCTGGCAGAGCAGGGAGGAGTGGAGAAGCGATTACTTTCTACACAGAGGAAGACATTCCATTGCTGCGGAATGTTGCTAATCTAATGGCAGCATCGGGATGTGAAGTTCCGCCCTGGCTCATGAAGTTGCAAAAAAAGAAGTGGAAGAAGCACCGGCCCAAAAGAGATTCAATCTCAACAAAACCAGACCTATAA | 777 | 0.4299 | MPDSFRVEYLVLDESDKLFEPELFKQIDSVLKACSNPSIIRSLFSATLPDFVEVRARELMHDAVRVIVGRKNMASETIKQKLIFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDNIRVDVIHSDLSEQERGNAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHRIGRSGRAGRSGEAITFYTEEDIPLLRNVANLMAASGCEVPPWLMKLQKKKWKKHRPKRDSISTKPDL | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g02551 | 258 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1 | 66 | IPR014001 | - | |
Vimu6g02551 | 258 | Pfam | Helicase conserved C-terminal domain | 95 | 199 | IPR001650 | - | |
Vimu6g02551 | 258 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 5 | 242 | IPR027417 | - | |
Vimu6g02551 | 258 | Gene3D | - | 66 | 243 | IPR027417 | - | |
Vimu6g02551 | 258 | SMART | helicmild6 | 118 | 199 | IPR001650 | - | |
Vimu6g02551 | 258 | CDD | SF2_C_DEAD | 78 | 208 | - | - | |
Vimu6g02551 | 258 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 77 | 238 | IPR001650 | - | |
Vimu6g02551 | 258 | PANTHER | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 7 | 244 | - | - | |
Vimu6g02551 | 258 | Gene3D | - | 3 | 65 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g02551 | Vimu-Chr6 | 22210090 | 22211890 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g02551 | 7 | 231 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 34.222 | 2.10e-37 | 134 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g02551 | K14779 | - | gmx:100800969 | 451.825 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu6g02551 | 6 | 22210090 | 22211890 | Vimu6g02551 | 6 | 22210090 | 22211890 | ECH |