Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g02527 | ATGGGCAACGTCTCAAGCGGCGGCGCCAACCACCGTCGCCGGCACAGCGGAGCTTTAAGGCGGAATCATCCGCCGCCTCCACCGCCGGTGACGCCGCAGCCTGAGATCGCCGCGAATCCATTTGTGTACCAGGGTGCCGCACCTTATGCGAACCCTACCCTACATTACCCGCAGTACCATTACCCCGGTTACTACCCTCCGGCGCCTCCCATGCCTCATCAGCATCATCATCAACAGCATCAACATCATCATCTACAGCATCAACATCATCATCCACAAAATCAGCATCAACATCATCTGCACATGGACCCGGCCTGGATTCCAGGGCGTTACCCTTGTGGGCCCGTGATGCCTAACCCTGCACCTTTTGTTGAGCACCAGAAGGCCGTTACCATAAGGAACGATGTCAATATCAGGAAAGAGAGTCTTAGGCTTGAACCTGATGAGGGAAATTCTTCCCACTTCCTTATCTCGTTTTCCTTCGATGCCACCGTTTCTGGGAGGCTCGTTCATTTGAGCTCTCATGGTAGCTTGAGTTTTACGGAGTGTTATGGCAACTCTTTTCTTTTACCTTACCAACACCCGATCCTGTGGTTACCCTCTGAATCACATGAATCATGGTTTGGCAGTGAAGTTGGTCATGTCCCCAAAACCAGCGTCACCATTTATTTCTTTGCAAAAGAAGGTGAAGACTCCATCCTCACACCAGTGAAGGAAAACAATCCTGCTCCACTGACAGTGAATTTTGAGCAAGGTCTTGGCCAGAAGTTTAGGCAGCCATCTGGAACTGGTATTGATTTTTCTGTTTTTGAGGAGTCCGAGTTACTGAAAGTGGGGGATATGGATGTGTACCCTCTAGCAGTAAAGGCAGACGCTTCCCCTGGTAATCATGATGAGTCGGATAGAACTCCAGCATCTGGTAACACAAACTCACAGATTACCCAAGCAGTGTTTGAAAAGGAGAAAGGAGAGTTCCGGGTGAAAGTTATTAAGCAGATCTTGTGGGTGAATGGAATGAGGTATGAGCTGCAGGAGATATATGGCATTGGAAATTCAACGGAAGCTGACGTGGATGAGAGTGACCAAGGAAAAGAATGTGTCATCTGCTTGTCGGAGCCTCGGGATACAATTGTTCATCCCTGCCGCCATATGTATGTCACTTTTCAGTCCGGGGCTCTTGGCAAACTCTGTATGTGTAGTGGATGTGCGAAGGTATTGAGGTTCCAGACAAATAGATGCCCAATTTGCAGACAACCAGTGGAGAGGCTTTTGGAGATAAAGGTAGGGTCTGAGGAGTGA | 1299 | 0.4927 | MGNVSSGGANHRRRHSGALRRNHPPPPPPVTPQPEIAANPFVYQGAAPYANPTLHYPQYHYPGYYPPAPPMPHQHHHQQHQHHHLQHQHHHPQNQHQHHLHMDPAWIPGRYPCGPVMPNPAPFVEHQKAVTIRNDVNIRKESLRLEPDEGNSSHFLISFSFDATVSGRLVHLSSHGSLSFTECYGNSFLLPYQHPILWLPSESHESWFGSEVGHVPKTSVTIYFFAKEGEDSILTPVKENNPAPLTVNFEQGLGQKFRQPSGTGIDFSVFEESELLKVGDMDVYPLAVKADASPGNHDESDRTPASGNTNSQITQAVFEKEKGEFRVKVIKQILWVNGMRYELQEIYGIGNSTEADVDESDQGKECVICLSEPRDTIVHPCRHMYVTFQSGALGKLCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGSEE | 432 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g02527 | 432 | MobiDBLite | consensus disorder prediction | 75 | 96 | - | - | |
Vimu6g02527 | 432 | PANTHER | MAHOGUNIN | 1 | 427 | IPR045194 | GO:0061630 | |
Vimu6g02527 | 432 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Vimu6g02527 | 432 | FunFam | probable E3 ubiquitin-protein ligase LOG2 | 350 | 427 | - | - | |
Vimu6g02527 | 432 | SUPERFAMILY | RING/U-box | 365 | 422 | - | - | |
Vimu6g02527 | 432 | MobiDBLite | consensus disorder prediction | 290 | 310 | - | - | |
Vimu6g02527 | 432 | CDD | mRING-HC-C3HC5_MGRN1-like | 364 | 417 | IPR045195 | - | |
Vimu6g02527 | 432 | MobiDBLite | consensus disorder prediction | 65 | 100 | - | - | |
Vimu6g02527 | 432 | MobiDBLite | consensus disorder prediction | 21 | 35 | - | - | |
Vimu6g02527 | 432 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 349 | 427 | IPR013083 | - | |
Vimu6g02527 | 432 | ProSiteProfiles | Zinc finger RING-type profile. | 366 | 417 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g02527 | Vimu-Chr6 | 22020624 | 22024899 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g02527 | 35 | 384 | C3H Transcription Factor Family | AT3G09770 | 46.537 | 2.24e-91 | 278 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g02527 | - | - | gmx:100807343 | 522.702 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu6g02527 | 6 | 22020624 | 22024899 | Vimu6g02527 | 6 | 22020624 | 22024899 | ECH |