Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02524 TCCTTCTTTTGGAGTGAGGAGAAGTGTTTCCGGTGGGATTATTTGTCTAATTTGTTGAGCTCAAGGTCTTTGTGTTACAACGTATGCGATCGTGGTGATTTGTTTGCGAAGTTACCTACTGATTTTATCACAGAATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGCTGGCAGCTGAACAAGAAGCACAAAGGATTGTCAATGCTGCCAAAAATGTATCATTATTGTCCCTTGATAGAAAAATTGGCTAGACTGAAGCAGGCCAAAGAAAACGCTGAAAAGGAAATTGCTGAGTACAGAGCTCAGTTGGAGTACGAGTTTCAAAAGAAAAGTAGTGGAGATTCTGGTGCTAATGTGAAGAGACTTGAGCTAGACACTGGTGCAAAGATCCATCACCTGAAAACTGAGGCAGGGAGGATATCAGGGGACGTTGTCACCATGCTCCTCAAGTATGTAACTAGTGTGAAGAATTAA 480 0.425 SFFWSEEKCFRWDYLSNLLSSRSLCYNVCDRGDLFAKLPTDFITEWHPTGVKVEFNSCWQLNKKHKGLSMLPKMYHYCPLIEKLARLKQAKENAEKEIAEYRAQLEYEFQKKSSGDSGANVKRLELDTGAKIHHLKTEAGRISGDVVTMLLKYVTSVKN 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02524 159 Pfam Vacuolar (H+)-ATPase G subunit 83 158 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vimu6g02524 159 Coils Coil 80 111 - -
Vimu6g02524 159 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 82 159 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vimu6g02524 159 Gene3D - 72 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02524 Vimu-Chr6 21992036 21992954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02524 83 159 Primary Pumps ATPases(2) AT4G23710 63.750 2.33e-27 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02524 K02152 - gmx:100305477 129.798