Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02500 ATGGAGGTTGGAAAGAAGAAGATGCTCAAGTCTTTGATCTCAAAGGTGATGAAGGGTCTTCCGTTCTTGGCACCCAATGGAGCACGTACGAGAAGGGTTTGTTATGTGAGTGACATTGACGAGGAAAGCGAAAATGCGAGGAGGGTGCCGGAAGATGTTAAGGAAGGACATTTTGCTGTTATTGCAATTCACGGTGAAGAGAGCAAAAGGTTCGTTGTTGAGTTAGATTATTTAACTGATCCTGCTTTCTTGAAGCTGCTGGAGCAAGCCAGTGAAGAGTATGGCTTTCGACAAAAGGGTGCACTTGTAGTTCCTTGCAGCCCTCAAGAACTTCAGAAGATTATAGACAACAAACGACTCAATGTCGCTTCCTAA 375 0.4453 MEVGKKKMLKSLISKVMKGLPFLAPNGARTRRVCYVSDIDEESENARRVPEDVKEGHFAVIAIHGEESKRFVVELDYLTDPAFLKLLEQASEEYGFRQKGALVVPCSPQELQKIIDNKRLNVAS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02500 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 114 IPR003676 GO:0009733
Vimu6g02500 124 Pfam Auxin responsive protein 37 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02500 Vimu-Chr6 21753848 21754892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02500 38 106 Calmodulin-binding Proteins AT5G20810 44.928 8.86e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02500 - K14488 gmx:102661602 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02500 6 21753848 21754892 Vimu6g02500 6 21753848 21754892 ECH
Vimu6g02500 6 21753848 21754892 Vimu3g01264 3 22273621 22273941 PCT