Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02499 ATGGGTAAAACATGTACAACTTGTTCTTGGGGACTGTGGATGGGAGGGGTTGGAGTACTGGTGCATGTCATGAGGAAACTACAATCCTCTTTCTCACGTTCAAAAGGGGTGAAGCATGGCCATTTTGTTGTGATTGCAACTCAAGGGTGGAAGCCTGAGAGATTCTTCATTGAATTGGGGTATTTAGATCACCCTGACTTTGTGAAGTTGTTAGAGCAAGCTGAAGAAGAGTTTGGGTTCTCTCAGGTGGGAGCACTTGCCATTCCTTGCCAACCTGATGAACTCAAGAGAATCATTGGAAGGGAAAATAATAGGAACAAGGGCATTACCTGTTGGGTTAAAGGGATTACAGTTGCATGA 360 0.4444 MGKTCTTCSWGLWMGGVGVLVHVMRKLQSSFSRSKGVKHGHFVVIATQGWKPERFFIELGYLDHPDFVKLLEQAEEEFGFSQVGALAIPCQPDELKRIIGRENNRNKGITCWVKGITVA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02499 119 Pfam Auxin responsive protein 31 99 IPR003676 GO:0009733
Vimu6g02499 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02499 Vimu-Chr6 21739011 21739898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02499 37 100 Calmodulin-binding Proteins AT4G34750 42.188 2.98e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02499 - K14488 gmx:100795119 182.185