Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02478 ATGGCTCGCAGTATATCGTACATTACAGGCACACAACTTCTCTCTCTCAGGCGCCATCCAAGCATCGCCATCGTCGATGTCAGGGACGATGAAAGGGGTTACGATGGACACATATCGGGGTCTCTTCATTACGCAAGCGATACTTTCTCCGATAACATTTCAAACCTCGTTCAGGCTGTTAAAGGCAAAGACACCGTCGTCTTCCACTGCGCTCTAAGCCAGGTTCGTGGCCCAACTTGTGCTAGGAGGCTTGTCAATTATCTCGAGGAGAACAAGGAAGATACAGGGATAAAGAACGTTATGGTGTTGGAACGTGGCTTCAATGGGTGGGAAGCTTCTGGTAGACCTGTTTGCCGCTGCACTAATATTCCTTGCAAAGGAGAGTGTGAGCCTTAA 396 0.4899 MARSISYITGTQLLSLRRHPSIAIVDVRDDERGYDGHISGSLHYASDTFSDNISNLVQAVKGKDTVVFHCALSQVRGPTCARRLVNYLEENKEDTGIKNVMVLERGFNGWEASGRPVCRCTNIPCKGECEP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02478 131 SMART rhod_4 8 116 IPR001763 -
Vimu6g02478 131 Gene3D - 1 130 IPR036873 -
Vimu6g02478 131 ProSiteProfiles Rhodanese domain profile. 18 119 IPR001763 -
Vimu6g02478 131 FunFam Dual-specificity phosphatase CDC25 1 130 - -
Vimu6g02478 131 Pfam Rhodanese-like domain 12 112 IPR001763 -
Vimu6g02478 131 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 3 127 IPR036873 -
Vimu6g02478 131 PANTHER M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 5 124 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02478 1 75 Sulfurtransferasese or Rhodanese AT5G03455 77.333 1.96e-37 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02478 K18065 - gmx:100305790 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02478 6 21543728 21545911 Vimu6g02478 6 21543728 21545911 ECH