Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02473 ATGCAAAATGGTGGTTGTTTGAGAGAAATGAAGAACTTGAGCTGCCATGTTATCGCTGGGCGTTGGTTCATGTTGTATGCATCTTTGCTTATCATGGCTGCTGCAGGTTCAGTATATATGTTTGGCATGTACTCTAACGAGGTCAAAACCTCTTTGGGGTATGACCAAACCACTCTCAACTTGCTCGGCTTCTTTAAAGACATGGGTGCCACAGTTGGAATCATATCGGGGTTGATCAACGAGGTAACACCACCCTGGGTGGTACTCTCAATAGGGGTCCTTATGAACTTCTTTGGCTACTTCATGATATGGCTTGCAGTCTCTGCCCGCATTCCCAAACCCCAACTTTGGCAAATGTCTCTCTACACTTTCATTGGTGCAAATTCTCAAACCTTTGCCAACACTGGTGCTTTGGTCACATGTGTCAAGAACTTCCCAGGAAGCCGTGGTAGCCTTTTAGGCCTACTCAAAGGTTACGTTGGTCTAAGTGGAGCAATCATCGCTCAGTTCTACCATGCCTTCTATGGTGATCACAACCCTCAAGCTCTTATCTTACTCATTGCGTGGCTTCCTCCTGCTGTTAACTTCCTTTTCCTTCCAACAATTCGGATATTCAACAACGTTTACTATCACCCTCCCAACGAGAACAAGGTTTTCTATCACCTTCTATGGATTTCACTTGCCCTTGCTGGGTTTCTCATGGTTTTGATCTTAATGCAAAGCAAGCTCACTTTTTCAAGGCCCGAATTCGTAGCCGATGGGGTTGTGGTTCTTTTCCTTCTTCTTCTCCCACTTGTTGTGGTATTCAGAGAGGAAATAAAGCAATTGAAAGCCAAAACTCAAGGTGTTACCGACTCAACCTCCCAGTTGAAAGTAGCCACTGAAGTTATTCCACCTCCAAACGTGGAGCAAGAAGTACCAGCAACAACAGGTTCGCTCGAGAAAAGTTCTTGTTTCAGGAACATACTCAACCCCCCAAAGAGGGGAGAAGACTACACCATTCTGCAAGCACTTTTCAGTATTGACATGCTGATTCTGTTCGCTGCAACAATATTTGGTGCTGGCGGAGCATTAACAGCCGTAGACAATCTAGGACAGATTGGAAGGTCATTGGGATACCCGAGGAAGAGCATCACGACATTCGTGTCATTGTTAAGCATATGGAACTATTTGGGAAGGGTAGTTGCAGGTTTTGCCTCTGAGATCTTGTTGATCAAATACAAAGTCCCTCGTCCCTTCATGCTCACTGTTGTTATGCTTCTCTCTTGTGTTGGCCATATTCTGATTGCCCTTGGTGCCCCAAATTCCCTCTACTTCGCTTCCGTGATTATAGGGTTCTGTTTGGGAGCTCAGTGGTCGCTAATGTTTGCGATCATATCAGAAATATTTGGCCTTAAACATTACTCCACGTTGTACAACTTTGGAGCCGTGGCAAGCCCTGTTGGATCTTACATTCTAAACGTGAGACTGACAGGTGTTTTGTATGATAAAGAGGCTTTGAAACAGTTGAAGGCCAAAGGACTCTCGAGACAAGCGGGGAAGGAGCTTAACTGCGTTGGAGTGCAGTGCTACAGAATGGCGTTTGTCATAATCACGGCGGCGACGCTGTTTGCCTGCTTTATATCTTTTGTTTTGGTGCTGAGAACTAGAAAATTTTACAAAGGGGATATCTATAGAAACTTCAGAGTAGAACATGTAACCAAAGAGAATGAGATCATCGAAACTGGTATGTTAGAAACTGAAGGACACGGAAGTGCATTAGGAGAACAAGATAAGAAAAACAGAAATTGA 1791 0.4444 MQNGGCLREMKNLSCHVIAGRWFMLYASLLIMAAAGSVYMFGMYSNEVKTSLGYDQTTLNLLGFFKDMGATVGIISGLINEVTPPWVVLSIGVLMNFFGYFMIWLAVSARIPKPQLWQMSLYTFIGANSQTFANTGALVTCVKNFPGSRGSLLGLLKGYVGLSGAIIAQFYHAFYGDHNPQALILLIAWLPPAVNFLFLPTIRIFNNVYYHPPNENKVFYHLLWISLALAGFLMVLILMQSKLTFSRPEFVADGVVVLFLLLLPLVVVFREEIKQLKAKTQGVTDSTSQLKVATEVIPPPNVEQEVPATTGSLEKSSCFRNILNPPKRGEDYTILQALFSIDMLILFAATIFGAGGALTAVDNLGQIGRSLGYPRKSITTFVSLLSIWNYLGRVVAGFASEILLIKYKVPRPFMLTVVMLLSCVGHILIALGAPNSLYFASVIIGFCLGAQWSLMFAIISEIFGLKHYSTLYNFGAVASPVGSYILNVRLTGVLYDKEALKQLKAKGLSRQAGKELNCVGVQCYRMAFVIITAATLFACFISFVLVLRTRKFYKGDIYRNFRVEHVTKENEIIETGMLETEGHGSALGEQDKKNRN 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02473 596 Gene3D MFS general substrate transporter like domains 334 553 IPR036259 -
Vimu6g02473 596 Pfam Major Facilitator Superfamily 350 549 IPR011701 GO:0022857|GO:0055085
Vimu6g02473 596 CDD MFS_Mch1p_like 20 539 - -
Vimu6g02473 596 Pfam Nodulin-like 21 269 IPR010658 -
Vimu6g02473 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 22 559 - -
Vimu6g02473 596 SUPERFAMILY MFS general substrate transporter 21 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02473 Vimu-Chr6 21506589 21508379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02473 9 562 Nodulin-like Gene Family AT2G39210 60.893 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02473 - - gmx:100798313 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02473 6 21506589 21508379 Vimu3g03596 3 48703057 48704868 ECH
Vimu6g02473 6 21506589 21508379 Vimu6g02473 6 21506589 21508379 ECH