Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02472 ATGGGGGTGGCGGAGTTGAGAGGAATGAAGAGTTTCGGCTACAATGTTATCACCGGGCGTTGGTTCATGCTGTTTGCATCTTTACTTATCATGTCCGTTGCTGGGGCAACCTATATGTTTGGAGCGTACTCTAACGAGGTCAAAACCTCTTTGGGGTACGACCAATCCACTCTCAACTTGCTCAGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCGTATCCGGGTTGATCAACGAGATAACACCACCCTGGGTGGTACTCTCTCTAGGGGTTCTTATGAACTTCTTTGGCTACTTCATGATATGGCTTGCAGTCTCTGGCCGCATTGCCAAACCCCAACTTTGGAAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACCTTTGCCAACACTGGTGCTTTGGTCACATGTGTCAAGAACTTCCCAGGAAGCCGTGGCAGTCTTTTAGGCCTACTCAAAGGTTACGTTGGTCTAAGTGGTGCCATCATCACACAGCTCTACCATGCCTTCTATGGTGATCACAACCCTCAGGCCCTTATCTTACTCATTGCGTGGCTCCCTGCCGCTGTTTCCTTCCTTTTCCTTCCAACAATTCGGATATTCAACACAGTCCACCAGCCTAAGAACAACAGAGTTTTCTACCACCTTCTGTATATTTCACTTTGTCTTGCAGGGTTTCTCATGGTTTTGATCCTTGTACAAAACAAGCTTAGTTTCTCAAGGATTGAGTACACAGTCGATGGCCTTGTTGTTCTCTCCTTTCTTCTTCTCCCACTCGCTGTGGTATTTAGAGAGGAGGTAAATCATTTAAAGGCCAAAACGGAAGGTTTGACCGATTCAGCACCTGAGTTGAAAGTAGTCACTGAAGTTATTCCACCTCCAAACGTCGAGCAAGAAGTACTACCAACCACCACAAGTTCACACGAGAAAAGTTCATGTTTCAGGAACATACTCAACCCCCCTAAGAGGGGAGAAGACTACACCATTTTGCAAGCACTTTTCAGTGTGGACATGCTGACTTTGTTCGTTGCAACAACGTTCGGTGCTGGCGGAACATTAACAGCCATAGACAATCTAGGACAGATTGGAAACTCATTGGGTTACCCGAGTAAAAGCACGACAACCTTTGTGTCCTTGGTGAGCATATGGAACTACTTAGGAAGAGTAGCTGCAGGTTATGCCTCTGAAGTCCTCTTAGCCAAATACAAAGTTCCTCGTCCCTACATGGTCACTCTGGTTTTGCTTCTCTCTTGTGTTGGGCATATTCTGATAGCCCTTGGCGTCCCAAACTCTCTCTACTTGTCTTCAGTGATTATTGGGTTTTGTTTTGGAGCTCAGTGGCCACTGATGTTTGCAATCATATCAGAAATATTTGGCCTTAAATACTACTCCACGTTATACAACTTAGGAGGCGCGGCAAGCCCAGTTGGATCTTACATTCTAAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACAATTGAAGGCCAAAGGACTAACGAGAGAAACAGGGAAGGACCTAACTTGTGTAGGAGTGCAATGCTACAGAATGGCTTTTATCATAATCACAGCTTCAACGTTGGTTGCGTGTTTAGCCTCGCTCATCTTGGCCCTGAGGACTAGAAAATTTTACAGAGGGGATATCTACAGCAAGTTTAGAAGGGAACATGAAACAACAGAGAATGAGACGGATATTACAAAGAATGGTGTTAGATGTTCTGGTTGA 1746 0.4507 MGVAELRGMKSFGYNVITGRWFMLFASLLIMSVAGATYMFGAYSNEVKTSLGYDQSTLNLLSFFKDLGANVGVVSGLINEITPPWVVLSLGVLMNFFGYFMIWLAVSGRIAKPQLWKMCLYICIGANSQTFANTGALVTCVKNFPGSRGSLLGLLKGYVGLSGAIITQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRIFNTVHQPKNNRVFYHLLYISLCLAGFLMVLILVQNKLSFSRIEYTVDGLVVLSFLLLPLAVVFREEVNHLKAKTEGLTDSAPELKVVTEVIPPPNVEQEVLPTTTSSHEKSSCFRNILNPPKRGEDYTILQALFSVDMLTLFVATTFGAGGTLTAIDNLGQIGNSLGYPSKSTTTFVSLVSIWNYLGRVAAGYASEVLLAKYKVPRPYMVTLVLLLSCVGHILIALGVPNSLYLSSVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNLGGAASPVGSYILNVKVAGVLYDKEALKQLKAKGLTRETGKDLTCVGVQCYRMAFIIITASTLVACLASLILALRTRKFYRGDIYSKFRREHETTENETDITKNGVRCSG 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02472 581 Pfam Nodulin-like 20 266 IPR010658 -
Vimu6g02472 581 Pfam Major Facilitator Superfamily 362 546 IPR011701 GO:0022857|GO:0055085
Vimu6g02472 581 SUPERFAMILY MFS general substrate transporter 20 550 IPR036259 -
Vimu6g02472 581 Gene3D MFS general substrate transporter like domains 332 550 IPR036259 -
Vimu6g02472 581 FunFam Nodulin family protein 332 553 - -
Vimu6g02472 581 CDD MFS_Mch1p_like 19 537 - -
Vimu6g02472 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02472 Vimu-Chr6 21502426 21504171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02472 9 562 Nodulin-like Gene Family AT2G39210 63.943 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02472 - - gmx:100797779 961.444