Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02405 ATGGCGTTGACTTCAGAATATTTTTCACTCTTTCTCCCCCTACTCCTGTCAGTTCTGTTTATCTTCCTCCTCCGTCGCAAAACCGCAGCCAGAAACCGCCGTCTTCCGCCGGGACCACCGGGATGGCCCATATTCGGAAACATGTTTCAGCTTGGAGACATGCCTCACCGCACCCTCACCGAACTAAGGGCCAAACACGGCCCCGTCGTGTGGCTCCAAATCGGAGCCATGAACACCATGGCTATTCTCTCAGCCGACGCCGCCACCGTGTTCTTCAAGCATCACGACCACGACTTCGCAGACCGCACCATAACCGAAACCATGCGAGTCCACAACTACAACAAATCCTCCTTGGCCTTAGCCCCTTACGGCCCCTACTGGCGCCTCATGCGGCGCCTCGTCACCGTGGACATGCTGGTGGCGAAACGCATAAACGAAACCGCTCCAGTGCGGCGGAAGTGCGTAAACGACATGATAACATGGTTGAGCAAAGAGGCTGAGAAGTTGGAAGAGGGTGGCGGAGTCCACGTGGCGCGGTTCGTGTTCCTGATGTCGTTCAACCTCTTAGGGAACCTGATGCTGTCGCGGGACCTTTTCGACCCTGACTCGGAAGACGGGTCGGAGTTTTTCGCTGCGATGATGGGTTTGATGGAGTGGTCAGGGCACGCTAACGTCGCCGACATGTTCCCGTGGTTGAGGCGGCTGGACCCACAAGGTTTGAGGAGGAAGATGGATCGAGACATGAGCAAAGCTCTGGAAATCGCGTCGAAGTTCGTGAAACAGCGTTTGGAAGATAAAAAAACAAGGGACTTCTTGGATGTGTTGATTGACTTTCAAAGCAGCAACAGTGAAGAAGCACTCAGATTATCAGACAAAGACCTCAACATTTTCATTTTGGAAATATTCTTGGCTGGGTCAGAAACAACAAGCAGCACAATTGAATGGACGATGATGGAGCTTCTGCGCAAGCCGGAGTGGCTGGAGAAGGTGAAAAGCGAGCTTGATCGGGTGGTTGGGCGTGAAAGAAAATTTGAAGAGAGTGACATAGATAACCTTCCTTACCTACAAGCCGTGATTAAGGAAACACTTCGATTGCACCCTCCCATTCCGTTCCTTGTTCCTCGGAAGGCTATCAAGAACACAAAGTTCATGGGATACGACATTCCGAAAGACACCCAGGTTTTGGTGAATGCCTGGGCAATAGGGAGAGACCCGAGTGTCTGGGAGCAACCCCTTGAGTTCAAACCCCAACGGTTTGTCGATGAATGCAAGAACATTGATTACAAGGGAACTAATTTTGGGTTTATTCCTTTTGGAAGTGGACGAAGAATATGTGCAGGTGTGCCCCTAGCGCACAGAATTCTTCATCTTGTGTTGGGATCGTTGCTTCACGAATTTGAATGGAAACTTGAGAGTCATGTCACACCCTCCACCTTGGATACCAGGGAAAGGCTCGGTATCACCATGCGAAAGCTTCAACCTTTGCTTGCTGTGCCTAAATTAATTCCCTCTTCCTCTTCCATCATTAATCATTAA 1536 0.5065 MALTSEYFSLFLPLLLSVLFIFLLRRKTAARNRRLPPGPPGWPIFGNMFQLGDMPHRTLTELRAKHGPVVWLQIGAMNTMAILSADAATVFFKHHDHDFADRTITETMRVHNYNKSSLALAPYGPYWRLMRRLVTVDMLVAKRINETAPVRRKCVNDMITWLSKEAEKLEEGGGVHVARFVFLMSFNLLGNLMLSRDLFDPDSEDGSEFFAAMMGLMEWSGHANVADMFPWLRRLDPQGLRRKMDRDMSKALEIASKFVKQRLEDKKTRDFLDVLIDFQSSNSEEALRLSDKDLNIFILEIFLAGSETTSSTIEWTMMELLRKPEWLEKVKSELDRVVGRERKFEESDIDNLPYLQAVIKETLRLHPPIPFLVPRKAIKNTKFMGYDIPKDTQVLVNAWAIGRDPSVWEQPLEFKPQRFVDECKNIDYKGTNFGFIPFGSGRRICAGVPLAHRILHLVLGSLLHEFEWKLESHVTPSTLDTRERLGITMRKLQPLLAVPKLIPSSSSIINH 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02405 511 Gene3D Cytochrome P450 21 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 CDD CYP76-like 65 499 - -
Vimu6g02405 511 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 FunFam Cytochrome P450 76C4 27 498 - -
Vimu6g02405 511 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 500 - -
Vimu6g02405 511 Pfam Cytochrome P450 36 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02405 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02405 Vimu-Chr6 21029367 21031632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02405 5 499 Cytochrome P450 AT3G52970 44.886 2.08e-150 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02405 K22983 - gmx:100785241 793.112