Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02379 ATGGTTCAGAAGTACTTGTTGCACGAGCTACTTCAGGAGGATCAAGAGCCCTTTCTTCTAAACAATTACATTTCCGATAGGCGAAGCCAGATGAAACGGCCTTCCTCTAATACCTCTTTGCAAGTTAAGAAACACAAATCAACCAATCCAACCCCAAGCTTCCCGGGGAATTTCTGCAAAAGTGCTTGTCTTTTTTCCCTCACAGACACCCCAGATTTCAGAAAATCTCCATTCTTCGAATTTGCTTCCGCAGCAAAAAGCCCTTGTAAATCACCCAACGCTATTTTCCTTCACATCCCTACCCGAACCGCGTCTCTGCTTCTGGAAGCAGCTGTCAGGATCCAGAAACACTCCTCACCCGCTTCACGGCCCAAAACGAAAGCCCACTCCTTCGGTCTCTTTGGTTCCCTCTACAAGAGACTCACGCAACGGGGCCAGAAAAAGCGCGAGATAGAGGGTGATGGAAGCGTCAAGGTCTCGGTCAAGGACATTCTCAAGTGGGATTCCTCTGTTGGGCGAAAAAAAGTTTCCAACAAGAAAGAGGATGAAGAAACTGTGAATGTGAATGCGAATGCGTGTGAACTGGGGTTTGTGTGTTCTTACAATGGTAGAACTAGTAGTGCTGTTTGGTCAGAGACCAACGAGGATAAATCCCTCAACATGGAAACGTCTAGTAGCGGCTACTCCGACGAGATTAACTTCATAACCAATTACACAAACTCCACCTGCTTCTGCGAAAGTCCGTTCCGTTTTGTTCTTCAAACTAGTTCTCCCTCCTCCGGCCGCCACACGCCGGAGCTTACCTCGCCAAGTCGCCACGCAACTGAGGACTCGTTAGTTGAGTGGTGTTCTGATTTTGTCGGTAATGGAACGTGGGTCTGTGAGTTTGGCCGGAATGTCGCTTTTCGTGTGAAGAAGTTCGAATCAGGGGAAGAAGAGGAGGAAGACAAAGAACAGTGCAGTCCAGTGTGTGTGTTAGACCCACCGTTCGAGGACGATGACGAAGGGCATGGGAACGGTGATGAAGGAGAAGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGAGAGCCAAGCAGCAGTTATTGTACAAGCTTCGTAGATTTGAGAAACTGGCAGAGTTGGATCCGGTAGAACTTGAGAGAAGAATGCATGATGAAGAAGATGAGGAGGAGGAGGATGAATCATTTATGAAGGAAACATTACGTAAAGAAAATGACTGTAGAGAGGTGATTTTGAAAGGTCTGTGGCAGTCAAGGGTGTATGACAGACAGCAAATCCCAGATGAGTTTAAGAAGTTGGTATCTGATCTGATTATGGAAGAAGAGAGAGCACTTGATGAGTTGGAAGATAGGGATATGGTGATAACAAGGATATGCAAGAGGTTGGAGTTGTGGAAAGAAGTGGAGTCGAACACGATTGATATGATGATAGAAGATGACTTCTCTAGGGAGGATGGTGGGTGGAAGAAACATGTGGAGCAGATAAGAAATATGGCTGGGGAGCTTGAGTGTGCTATCTTCGGCTTTCTGCTGGAGGAATTTTCAGAGGAACTAGTATGCTAA 1572 0.4656 MVQKYLLHELLQEDQEPFLLNNYISDRRSQMKRPSSNTSLQVKKHKSTNPTPSFPGNFCKSACLFSLTDTPDFRKSPFFEFASAAKSPCKSPNAIFLHIPTRTASLLLEAAVRIQKHSSPASRPKTKAHSFGLFGSLYKRLTQRGQKKREIEGDGSVKVSVKDILKWDSSVGRKKVSNKKEDEETVNVNANACELGFVCSYNGRTSSAVWSETNEDKSLNMETSSSGYSDEINFITNYTNSTCFCESPFRFVLQTSSPSSGRHTPELTSPSRHATEDSLVEWCSDFVGNGTWVCEFGRNVAFRVKKFESGEEEEEDKEQCSPVCVLDPPFEDDDEGHGNGDEGEEGGFDLECSYAIVQRAKQQLLYKLRRFEKLAELDPVELERRMHDEEDEEEEDESFMKETLRKENDCREVILKGLWQSRVYDRQQIPDEFKKLVSDLIMEEERALDELEDRDMVITRICKRLELWKEVESNTIDMMIEDDFSREDGGWKKHVEQIRNMAGELECAIFGFLLEEFSEELVC 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02379 523 Coils Coil 434 454 - -
Vimu6g02379 523 PANTHER OS04G0572500 PROTEIN 1 521 - -
Vimu6g02379 523 MobiDBLite consensus disorder prediction 29 51 - -
Vimu6g02379 523 MobiDBLite consensus disorder prediction 311 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02379 Vimu-Chr6 20793725 20796310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02379 1 331 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 42.000 5.45e-58 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02379 - - gmx:100790018 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02379 6 20793725 20796310 Vimu6g02379 6 20793725 20796310 ECH