Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02372 ATGGAGTTGGTTGAGCTTAAATCAATCAAAGATGCACTTGTGGGACTTCCAGGCATAAACGGTCTATCAATTGAACAGAGGAAGAGGCTTACAATTGCTGCAGAATTGGTTGCCAACCCTTCAATTATCTTCATGGATGAACCGACATCTGGTCTTGATGCTAGAGCCGCTGCTATTGTTATGCGAACTGTGAGAAACACAGTGGACACTGGCAGAACCGTTGTGTGCACAATTCATCAACCAAGCATAGACATTTTTGAAGCTTTTGATGAGGTAAATTGGTCATATGAAATTATTATTAGAGTTCATATGTGA 315 0.4063 MELVELKSIKDALVGLPGINGLSIEQRKRLTIAAELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEVNWSYEIIIRVHM 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02372 104 Gene3D - 1 99 IPR027417 -
Vimu6g02372 104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 83 IPR027417 -
Vimu6g02372 104 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1 92 - -
Vimu6g02372 104 FunFam Uncharacterized protein 27 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02372 Vimu-Chr6 20704391 20704705 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02372 3 82 Calmodulin-binding Proteins AT2G36910 32.500 3.32e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02372 K08711 - osa:4327728 169.474