Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02362 ATGGATGCTGAATCGGAGAAGCGGGCATTCACCTCCACTTCTGTTTCTAGGTCCTCTTCCTGTGAAGGTATGGATCGGCTTGTTGACAAAGAGGAGATGGAAGCGGCCGAGACTCTTGCACAGTTAGCAATGCGTGATTCTCACTCTACTGACAAATGGTGCACTAAACTATGTGCCATTCCTGAAGTTCATCCTTCACCGACTCTTCACTCTGATCCCTCTCTTGGGACTGCGGACCAAGCTATAGCTATTGCAGATCAGCAGCAAGATGAAAAAGTACACGCTACTGCATCTGTAGAAGCAGAGAGGATTGAGCAGAATAACTGTTCCGAACCCATGGAGGTAGAGCAGGATGCCAATTTAATACCTAACTCAAGTCATACGGAGGTGGAACAGGATGCCAATTTAATACATAACTCAAGTCATACCGAGGTGGAACAGGATGCCAATTTAATAAATAACTCAAGTCATACCAAGGTGGAACAGGATGCCAATTTAATACAGAACTCGAGTCATACGGAGGTGGATCAGGAGCAGGATTCCAATGTAGCACATAAATCAAAGGAGCAGGATTCCAATGTAACACATAAATCAAAGGAGCTGGATTCCAATGTAACACATAAATCAAATAACCTTTTAGGTCGTTATAACAGGTCAAGGAAAAATTTAACTGAGGAAGAAAAAGAAGCAAGGAGGATGCGCAGGATATTGGCAAATAGAGAGTCAGCCAGGCAGACAATTCGACGTAGGCAGGCTCTGTGTGAGGAATTAACAAAAAAAGCTGCCACTTTGGTGGTGGAGAATGAAAGTCTAAAGAAGTGGATGTTTTATCTGAAAATTCATATTTTTTCCACACTTTCTGACAAAAAGGAGAAAGATTTGGCTTTGAAAGAGTATCAGTCTTTGGAGACTACAAATAAGTACTTAAAGGCACAAATCGCCAAGTCAACAAACACTGAAGAAGAGAAAACTCCCGTTGAGCCCGAGTCATCTGTGGCTGAGGTAACACCTTCGTCTGGTAGTGGTCCATGGTTCCTTTATAACCCTTTTCCAGTTCAACATGTATTTTGGCCTTCGCCCCTTCAGCCCACTTATCCAGTTCATTTACCAAATGCATCATTTAATTCCATCATCATTCCATCTATTGCTAATGTTCCTTGTTCTTCCGAGTCTGAATTATATCCCAAGCAAAATAACCTTATAAATGATAAGCAAACACCAAATCCATTTTACATGTTTCCATGCCCTTGGATATTCCCATGTCCGCAGTTTGGAAATGGACAATCATCACCTTCTTGTAGCCTGAAAGATAAACAAAATAATCTTTCTCTAGGCAAATCCTGTAGTTCTAGTTCATCTTTGAATACACTGGCAAATGTGGATTATCGAGCCTGGACAGAAGCCAGACTCGGTAATGACCCTTCAAGATTTTCATTGGATGGAGGTGAGAAGAAAACAGGATGTCACATTATAGAAAATTATCATGGACCCTCTCTTGGTTGTAATGGTCATGCTTGTGCTTTCGAACAAGAAAACGAGCTTCAATCACATTCTGGTCCAAACAATAAAGCATCTTCAACGGCTTATATTGGAGCATCTTCAGTTGAAAAGAAACAAAAACAGTTCATTTGCCAGGGGAAAAGTCTAGCTGATGCAGTTGCTGCGGCAGAAGCAAGAAAGAGGAGAAAGGAACTAACCAAGCAGAAAAGCATCCATAACCGCCAGTCTCGAATGCAGTGTTGA 1743 0.4177 MDAESEKRAFTSTSVSRSSSCEGMDRLVDKEEMEAAETLAQLAMRDSHSTDKWCTKLCAIPEVHPSPTLHSDPSLGTADQAIAIADQQQDEKVHATASVEAERIEQNNCSEPMEVEQDANLIPNSSHTEVEQDANLIHNSSHTEVEQDANLINNSSHTKVEQDANLIQNSSHTEVDQEQDSNVAHKSKEQDSNVTHKSKELDSNVTHKSNNLLGRYNRSRKNLTEEEKEARRMRRILANRESARQTIRRRQALCEELTKKAATLVVENESLKKWMFYLKIHIFSTLSDKKEKDLALKEYQSLETTNKYLKAQIAKSTNTEEEKTPVEPESSVAEVTPSSGSGPWFLYNPFPVQHVFWPSPLQPTYPVHLPNASFNSIIIPSIANVPCSSESELYPKQNNLINDKQTPNPFYMFPCPWIFPCPQFGNGQSSPSCSLKDKQNNLSLGKSCSSSSSLNTLANVDYRAWTEARLGNDPSRFSLDGGEKKTGCHIIENYHGPSLGCNGHACAFEQENELQSHSGPNNKASSTAYIGASSVEKKQKQFICQGKSLADAVAAAEARKRRKELTKQKSIHNRQSRMQC 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02362 580 MobiDBLite consensus disorder prediction 178 204 - -
Vimu6g02362 580 MobiDBLite consensus disorder prediction 170 229 - -
Vimu6g02362 580 Gene3D - 230 281 - -
Vimu6g02362 580 MobiDBLite consensus disorder prediction 1 24 - -
Vimu6g02362 580 SMART brlzneu 227 291 IPR004827 GO:0003700|GO:0006355
Vimu6g02362 580 MobiDBLite consensus disorder prediction 315 335 - -
Vimu6g02362 580 SUPERFAMILY Leucine zipper domain 231 278 IPR046347 GO:0003700|GO:0006355
Vimu6g02362 580 CDD bZIP_plant_GBF1 232 273 IPR045314 GO:0003700|GO:0006355
Vimu6g02362 580 Pfam bZIP transcription factor 227 276 IPR004827 GO:0003700|GO:0006355
Vimu6g02362 580 MobiDBLite consensus disorder prediction 561 580 - -
Vimu6g02362 580 Coils Coil 555 575 - -
Vimu6g02362 580 PANTHER G-BOX-BINDING FACTOR 3-RELATED 123 273 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vimu6g02362 580 Coils Coil 213 260 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02362 217 580 bZIP Transcription Factor Family AT1G19490 35.946 2.56e-41 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu6g02362 bZIP_1 2.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02362 - - vra:106757437 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02362 6 20613921 20618460 Vimu6g02362 6 20613921 20618460 ECH