Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02361 ATGAATAATGCAATAAACATGTTACAAAATTTGCTACTGTCACTACTGCTACTATTACCCTTTTTCTGTCCTTTGTCCGTTCAAGGATTTAATCAACATGAAAGAAAGCCATATATTGTATACATGGGAAATCTACCAGCGGATACAAACTATGCAGTGAAAGCCCACCACCACAACTTGTTAGAGACTGCGATGGGAAACGAGCAGTTAGCCAGAGCGTCCAAAATACATAGTTATGGAAAGAGCTTCAACGGATTTGTTGCACGACTTCTGCCACATGAAGCAGAGAGACTCCAAGAGGAGGAGAGTGTGGTTTCTGTGTTTCCAAATAAAGTTCGTCATCCACACACGACAAGGTCGTGGGATTTTCTAGGAATGCCCTTAAATGTGAAGAGAAATTCCATGATAGAAAGTCATATTATTGTGGGGGTGTTGGATACAGGCATTTCGATTGATAGCCCCAGTTTCGACGATACGGGGTATGGACCTCCCCCACGTAGATGGAAAGGCAAATGTGTAACTGGAGCAAACTTTACCGGCTGTAACAACAAGGTGATCGGAGCCACCTACTTCAATCTGGCCCAGAGCAACTCAAGCTACGACAGCGTGAGTCCGGCGGATGACCAGGGTCACGGCACTCACACGTCGTCGATCGTGGCGGGCTCGGTGGTGAACAAGGCGAGTCTGTTCGGCGTTGGCACAGGCACGGCGAGGGGTGGCGTCCCATCAGCTCGTCTGGCTATGTACAAGGTTTGCTGGACTGCAGGCTGCAGCGACATGGACATGCTCGCGGGCTTCGACCAGGCCATTGCGGACGGCGTCAACTTCCTCTCCGTTTCCATCGGAGGCCCCGCACATAACTTCCTCAGGGACCCAATTGCCATCGGAGCATTCCATGCTATGAGGAAAGGGATTCTCACTGCTTGCTCCGCCGGCAACGGTGGCCCTCGCTACATGTCCGTCGAGAATGTCGCGCCCTGGATTTTGACGGTAGCTGCTTCCTCCACTGATAGACAGTTCTTTACAGCTGCTGCTTTCGGTGATGGAAAAAACGTCACAGGAATGTCGATTAATACCTTTTCGCCCAAGAAAAAGATGTATCCATTGACTAGTGGACTCCTTGCTTCTAACGGTACCGAAGATGGCTTTGGCAGTCCTAGGGGTTGTGACTATGGGACTATGAGCAAGGAGAAGGTGAAGGGCAGGATAGTGTACTGTGTTGGGGGAACGGGAACACAGGACTTAACCATCAAAGATCTAGAGGGAGAAGGAACTATCGTAGTCGTTGACGACGTAATAGACGCCTCCTTCTCCACAGTTATTCCAGCTACCTTTGTTGAAGCCAATGCTGTGGATGAAACCATTGATCGCTACATCAATTCCACAAAGAATCCTGTAGCCGTTATTTACAAGACAACATCTAAACAAGTCCCTGCTCCAATGGTTGTTTCTTTTTCATCAAGAGGTCCTCAAACGGTCACCCCAAATATCTTCAAGGTGATAGCTCTCTCTATCTCTCTATCTCTCTATCTCTCCCTTTTCTTCCATTTGGCTTTGCTTCTAAATCTCTATTTGTTGTATATGAAGCCTGACTTGACTGCTCCGGGAGTGGACATACTAGCTGCTTATTCCAAACTGGAATCAATAACAGGGTACCGTGAAGACAATCGTTTTGCTGTTTTTAATATATTATCAGGAACATCTATGTCGTGTCCTCATGTCACTGCAACAGCTGCCTATGTCAAATCCTTCCACCCTGACTGGAGTCCTGCTGCAATTAAATCTGCTCTAATGACCACTGCCACTCCCATCAAGATGGGTGACAACTTCACGGTACTGGGATCTGGGTCAGGACAGATTAATCCTGTGAAAGCATTACATCCTGGTTTGGTCTACGACATTGGAGTGCAATCCTATGTCTCCTTCCTTTGTAAGGAAGGCTTCAACAAAACCAACATTGGCATACTACTTGGCATGAAAAATTTCAATTGCTCAAGCATTAAGATTGAGCCAGGAACGGACGGAATCAACTACCCCAGCATACATATCCAACTTGCCACTCCCCTTGATAGAATTTCTGGAGTTTTCTATCGGACTGTTACTAATGTAGGATATGGAAATTCAACTTACAAGGCTAAAGTTACAGCCCCTGAAGGTCTTTCAGTGAAGGTGATCCCAGATACATTGCGTTTTATCCAATTGCACCAAAAACTGTCATTTAAGGTTGTTGTGAAGGGGCCCCCAATGTCCTTGGACACTTATCTAAAATCTGGATCACTTGAATGGAACGACTCTAAACACACTGTCAGAAGTCCGATAATTGTCTATAAACCAATGTCATTCTATTGA 2349 0.4632 MNNAINMLQNLLLSLLLLLPFFCPLSVQGFNQHERKPYIVYMGNLPADTNYAVKAHHHNLLETAMGNEQLARASKIHSYGKSFNGFVARLLPHEAERLQEEESVVSVFPNKVRHPHTTRSWDFLGMPLNVKRNSMIESHIIVGVLDTGISIDSPSFDDTGYGPPPRRWKGKCVTGANFTGCNNKVIGATYFNLAQSNSSYDSVSPADDQGHGTHTSSIVAGSVVNKASLFGVGTGTARGGVPSARLAMYKVCWTAGCSDMDMLAGFDQAIADGVNFLSVSIGGPAHNFLRDPIAIGAFHAMRKGILTACSAGNGGPRYMSVENVAPWILTVAASSTDRQFFTAAAFGDGKNVTGMSINTFSPKKKMYPLTSGLLASNGTEDGFGSPRGCDYGTMSKEKVKGRIVYCVGGTGTQDLTIKDLEGEGTIVVVDDVIDASFSTVIPATFVEANAVDETIDRYINSTKNPVAVIYKTTSKQVPAPMVVSFSSRGPQTVTPNIFKVIALSISLSLYLSLFFHLALLLNLYLLYMKPDLTAPGVDILAAYSKLESITGYREDNRFAVFNILSGTSMSCPHVTATAAYVKSFHPDWSPAAIKSALMTTATPIKMGDNFTVLGSGSGQINPVKALHPGLVYDIGVQSYVSFLCKEGFNKTNIGILLGMKNFNCSSIKIEPGTDGINYPSIHIQLATPLDRISGVFYRTVTNVGYGNSTYKAKVTAPEGLSVKVIPDTLRFIQLHQKLSFKVVVKGPPMSLDTYLKSGSLEWNDSKHTVRSPIIVYKPMSFY 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02361 782 PRINTS Subtilisin serine protease family (S8) signature 565 581 IPR015500 -
Vimu6g02361 782 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vimu6g02361 782 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Vimu6g02361 782 Pfam Peptidase inhibitor I9 38 114 IPR010259 -
Vimu6g02361 782 Pfam Subtilase family 138 492 IPR000209 GO:0006508|GO:0008236
Vimu6g02361 782 CDD PA_subtilisin_like 347 469 - -
Vimu6g02361 782 Gene3D - 643 778 - -
Vimu6g02361 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 775 IPR045051 -
Vimu6g02361 782 Gene3D - 337 475 - -
Vimu6g02361 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 116 IPR037045 -
Vimu6g02361 782 CDD Peptidases_S8_3 114 602 IPR034197 -
Vimu6g02361 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 566 576 IPR023828 -
Vimu6g02361 782 Gene3D Peptidase S8/S53 domain 140 639 IPR036852 GO:0004252|GO:0006508
Vimu6g02361 782 Pfam Subtilase family 528 603 IPR000209 GO:0006508|GO:0008236
Vimu6g02361 782 ProSiteProfiles Serine proteases, subtilase domain profile. 120 626 - -
Vimu6g02361 782 Pfam Fibronectin type-III domain 676 775 IPR041469 -
Vimu6g02361 782 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 152 IPR023827 -
Vimu6g02361 782 SUPERFAMILY Subtilisin-like 131 626 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02361 Vimu-Chr6 20609237 20612612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02361 7 600 Subtilisin-like Serine Gene Family AT5G03620 54.426 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02361 - - gmx:100793716 1109.36