Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02360 ATGAACTTCAACAAGCAACTCTTTCTTCTTCTCAATCTTTTCTCAGTTCTATTTCTCTCAGGAGAAAGAGTGTTGCAAGCAGAGGCTAGCCATCATCATCATCATCACCATCACCATCACCATCATGGTCCAACAAAGTTGTTCGTTTTCGGAGACTCATATGCTGACACAGGCAACATTCAGAAAGCTGTTTCAAACTCATGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGCAGATTTTCCGACGGTAGAGTCCTCACCGATTACATTGCTAAGTATTTGAAAGTGAAATCTCCAATTCCCTACAGATATAGAAAACTGATGCCACAACATGTAAAATATGGGATGAACTTTGCGTTTGGAGGTACCGGTGTGTTCAACACGTTGGTTCCACTTCCAAACATGACAAACCAGATCGATTTCTTGCAACAGCTCATCAAAGACAAAGTCTACTCTGCCTTAGATCTCACCAACTCAGTTGCCCTTGTTTCTGTCGCTGGAAATGACTACAGTCATTTCTTGCAAACAAATGGCTCTGAGGGTTTAGCATCTTTCGTGGCTTCAGTGATTAATCAAACAACGATGAATCTGATTCGCATAAGAGAGCTGGGAGTGAAGAAAGTAGTGGTGGGTGCTCTGCAACCCATTGGATGCCTTCCCCAGATCACAGCCTCAACCTCATTCCAACGTTGCAATGAAACCTCCAACGCCCTCGTGCTTCTCCACAACACACTCTTGAACGAAGCAGTGACCACGTTAAACCAACAAACCAAGGAGGGTTCCACGTTCCGAATTCTTAACCTCTTCGACAGCTTCATGTCGGTGTTGAACCACCCTTCCACACACAACATTCGGGACAGGTTGAAGCCATGTTGTGTTGGTGTGAGCAGTAACTACTCGTGCGGGAGTGTGGAAAACAATGTTAAGAAATATAGGGTATGCGATGATCCCAAATCTGCTTTCTTTTGGGATTTTGTGCATCCTACACAAGCTGGATGGCATGCAGTGTACAACAAGTTGCGAACCATGAATGATCTTCAACGGATTCTTTACTAG 1068 0.4485 MNFNKQLFLLLNLFSVLFLSGERVLQAEASHHHHHHHHHHHHGPTKLFVFGDSYADTGNIQKAVSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPIPYRYRKLMPQHVKYGMNFAFGGTGVFNTLVPLPNMTNQIDFLQQLIKDKVYSALDLTNSVALVSVAGNDYSHFLQTNGSEGLASFVASVINQTTMNLIRIRELGVKKVVVGALQPIGCLPQITASTSFQRCNETSNALVLLHNTLLNEAVTTLNQQTKEGSTFRILNLFDSFMSVLNHPSTHNIRDRLKPCCVGVSSNYSCGSVENNVKKYRVCDDPKSAFFWDFVHPTQAGWHAVYNKLRTMNDLQRILY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02360 355 CDD SGNH_plant_lipase_like 47 344 IPR035669 -
Vimu6g02360 355 SUPERFAMILY SGNH hydrolase 43 344 - -
Vimu6g02360 355 Gene3D SGNH hydrolase 30 350 IPR036514 -
Vimu6g02360 355 Pfam GDSL-like Lipase/Acylhydrolase 47 343 IPR001087 GO:0016788
Vimu6g02360 355 PANTHER OSJNBB0059K02.9 PROTEIN 14 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02360 Vimu-Chr6 20600169 20603027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02360 45 340 Pollen Coat Proteome AT1G75930 26.708 1.63e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02360 - - gmx:100818373 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02360 6 20600169 20603027 Vimu6g02360 6 20600169 20603027 ECH