Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02346 ATGGAAAACATTGAGGAACGGAAGTACGGAGTTCGGAAATTAGAGATCTCAGACAAGAGCAAAGGCTTCATCGAGTTGCTGCAGCAACTCAGCGTTTGCGATTCCGTCTCTGACAGAGATTTCGAGAATCGATTTCGAGAGCTCAGTGCCGTTGGAGATGACCACGTTATCGGCGTGATTGAAGACGAGGCTTCTGGAAAGATCATTGCGACGGGAAGCGTGTTTATTGAGAAGAAATTTTTGAGAAATTGCGGCAAAGTTGGGCACATTGAGGACGTTGTTGTAGATTCCAGCGCTCGTGGGAAGCATTTGGGAAAGAGAATCATCAGCTTCCTGACGGAGCATGCGCGTTCCATGGGATGCTATAAGGTCATTCTTGATTGCAGCCTCGACAATAAGGCGTTCTACGAGAAATGTGGCTTCCACAACAAATCCATTCAGATGGCTATGTATTTTGCTCACAACTAG 468 0.4658 MENIEERKYGVRKLEISDKSKGFIELLQQLSVCDSVSDRDFENRFRELSAVGDDHVIGVIEDEASGKIIATGSVFIEKKFLRNCGKVGHIEDVVVDSSARGKHLGKRIISFLTEHARSMGCYKVILDCSLDNKAFYEKCGFHNKSIQMAMYFAHN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02346 155 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 155 IPR000182 GO:0016747
Vimu6g02346 155 Pfam Acetyltransferase (GNAT) family 40 141 IPR000182 GO:0016747
Vimu6g02346 155 CDD NAT_SF 59 127 - -
Vimu6g02346 155 Gene3D - 6 153 - -
Vimu6g02346 155 FunFam Glucosamine 6-phosphate N-acetyltransferase 1 149 - -
Vimu6g02346 155 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 152 IPR016181 -
Vimu6g02346 155 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 5 148 IPR039143 GO:0004343|GO:0006048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu6g02346 Acetyltransf_1 1.6e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02346 K00621 - gmx:100499668 273.863