Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02329 ATGGTATCTTTCAAGAAACTGGCAAAAAGGGTGAAGGGGGTTGGTGGATTTGAGCCTGATCCTTACCCTGCTCATCATGAGGGTTTGCTCAATAACTATGAAGAAAAATGTGTGACTAACTCACCCCCGACAGGGTTTTTTGCTCTTTATGTCGGAGAAGAGCGGCAAAGATACGTGGTTCCAACCCGCTACCTTTCTCACCCCTTGTTCAAGATGCTGCTGGAGAAGACTTACAATGAGTTTGGATTTTCTCAGAGGAATGGACTGGTAGTTCCATGCAGTGTTTCCACGTTTGAGGAGGTGCTGAATGCTATAGAATGCAACAACGGCAAGTTTGACTTGGGAAAGTTTTTTGCAGAGTTTGTTTGA 369 0.4472 MVSFKKLAKRVKGVGGFEPDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02329 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 101 IPR003676 GO:0009733
Vimu6g02329 122 Pfam Auxin responsive protein 35 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02329 Vimu-Chr6 20367217 20367585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02329 31 108 Calmodulin-binding Proteins AT5G20810 47.561 1.38e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02329 K14488 - gmx:100776885 223.402