Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02286 ATGCAGGCCATTAATAGGCACCGTCCTAGCAAATGCAACGTTACTACACCTCTGCCAAGCTGTGTTTTTAGCCAAAAGCACCACCGATGTTACCACCAATCTTCCTCCTCGATTGTTGTTCAACCTTCTTCCTACTCTTTCTCTTTGTGGATGATTGACGGTGTTGGGTTGAGAATTAGGTGCGTGATGTTGAACATTGGAGTGGATGAAGAAGAGGTGTTGGTGAAGATGGAGATATTGTGTGATGAAATTGAAGAAGATGGAAAATGTGGGGTTGAGGCAAAGATTGAAGATGAAATGGAAAATGGAGAGGAACAGATTCAGTCATCTGAACAAGAGAGATTGACTGTGGAGTTTTGGCGGGAAGCTGACATTCTTTTCCAAGCTTCATCATCCAAATATGGTAGTACAATGGCCACTGTGGCAGAATATATGGTAGATGGTTCTCTTAGGCATGTATATCTTGATCATCGCAAGAGGCTGAAAATTGCAATGGATGCTGCTTTTGGAATGGAATATTTGCACTCAAAAAAATTGATGGCACCAGCTTCTGAATGGCAGCAGCAATAA 570 0.4228 MQAINRHRPSKCNVTTPLPSCVFSQKHHRCYHQSSSSIVVQPSSYSFSLWMIDGVGLRIRCVMLNIGVDEEEVLVKMEILCDEIEEDGKCGVEAKIEDEMENGEEQIQSSEQERLTVEFWREADILFQASSSKYGSTMATVAEYMVDGSLRHVYLDHRKRLKIAMDAAFGMEYLHSKKLMAPASEWQQQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02286 189 Coils Coil 93 113 - -
Vimu6g02286 189 PANTHER SERINE-THREONINE PROTEIN KINASE 106 179 - -
Vimu6g02286 189 SUPERFAMILY Protein kinase-like (PK-like) 113 179 IPR011009 -
Vimu6g02286 189 Gene3D Transferase(Phosphotransferase) domain 1 81 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02286 Vimu-Chr6 19999072 20000266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02286 108 180 MAP Kinase Kinase Kinase AT1G79570 57.778 1.73e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02286 - - vum:124838453 127.102