Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02217 ATGGGTTCTCTCCCACACGTAGTAGAGGACTGTTTGGGGTTTCTCCAACTCTTTAGCGACGGTTCTATTTTCCGTTCAAACGATATACAGTTCAAAATATCAGCAGTTCAAGATCATTCTGTAACATTCAAGGACTATCTCTTCCACAAGAGATTCAACCTTTCTCTTCGCTTCTACAAACCGCAACACGTAACGCTCAACACCAACAAGCTTCCTATTGTCATTTTCCTTCACGGTGGAGGCTTCTGCTTCGGTTCGCGCACCTGGCCCCATATTCACAACTGTTGCACGCGCCTCGCCGCAGGGCTCCAGGCGGTCGTCCTCTCGCCGGACTACCGCCTCGCGCCGGAACACCGCCTTCCGTCCGCGCTCGACGACGCCGTGGAGGCGGTGAGGTGGCTCCAGAGGCAGGGACTCAGGCTGAAGGAAGATGAAAACGGTGGGGACGCCTGGCTGAGTGCTGACGTTGACTTTGACCGCGTGTTTGTCGTCGGTGACTCCTCTGGCGGGAACATTGCCCACCACCTCGCGGTTCGGTTGGGGTCCGGTTCGAGTGAGATGGACCCGGTTCGGGTACGAGGTTACGTGTTGTTTGCGCCGTTTTTTGGCGGGGAGGTTCGGACCAAGTCTGAGGAAGGTCCACCAGAGCACATGCTGAACCTCGAGTTATTGGACAGGTGA 681 0.5565 MGSLPHVVEDCLGFLQLFSDGSIFRSNDIQFKISAVQDHSVTFKDYLFHKRFNLSLRFYKPQHVTLNTNKLPIVIFLHGGGFCFGSRTWPHIHNCCTRLAAGLQAVVLSPDYRLAPEHRLPSALDDAVEAVRWLQRQGLRLKEDENGGDAWLSADVDFDRVFVVGDSSGGNIAHHLAVRLGSGSSEMDPVRVRGYVLFAPFFGGEVRTKSEEGPPEHMLNLELLDR 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02217 226 SUPERFAMILY alpha/beta-Hydrolases 5 213 IPR029058 -
Vimu6g02217 226 Pfam alpha/beta hydrolase fold 74 212 IPR013094 GO:0016787
Vimu6g02217 226 Gene3D alpha/beta hydrolase 17 226 IPR029058 -
Vimu6g02217 226 PANTHER ARYLACETAMIDE DEACETYLASE 13 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02217 Vimu-Chr6 19444327 19445007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02217 7 211 Carbohydrate Esterase AT1G68620 37.198 5.26e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02217 - - vun:114190999 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02217 6 19444327 19445007 Vimu6g02217 6 19444327 19445007 ECH
Vimu6g02217 6 19444327 19445007 Vimu3g00249 3 2166764 2169226 PCT