Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02191 ATTAAAAACAGGATGAAGATGAGAGCTTTTCTTGTAGCTTGTTTGGCACTGTTCTGTATCCTAGGGGTTTGTCAAGGTGGCAACCTTAGAAAAAAATTCTACAAGCTAACATGTTCTCAAGCCGAGGACATTGTTAGGACCAAAGTCCAGGAACATGTCTCTGCAAGGCCTGAATTGCCTGCCAAGTTGATCAGACTGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGTTCGGTTTTGCTGGACTCCACTGCCAGTAACACAGCAGAAAAGGATTCGATTCCGAACTTATCTCTGTCAGGCTTCGATGTCATTGATGACATAAAAGCAGCATTGGAGGAAAAATGTCCTGGAACTGTATCATGTGCTGACATACTTGCATTGGCTGCTAGGGATGCTGTTTCTGTCCAGTTCAATAAGCCTATGTGGGAAGTGCTTACCGGTAGAAGGGATGGTAGAGTATCCATAAGTGGTGAAGCCTTAGCCAATCTGCCAGCACCTTTTTTCAACATCACCCAACTCAGACAAAGCTTTGAGAGTAAAAAGCTTACAGTGCATGATCTGGTTGTGTTATCAGGAGCACACACAATTGGGGTAGGTCATTGCAACTTATTCAGCAACAGGCTTTTCAACTTCACCGGAAAGGGTGATCAAGATCCTTCTCTGAATCCTACTTATGCCACTCTTTTGAAGACAAAATGTCAAAGTCTGAGTGACACCACCACTACAGTAGAGATGGATCCTGACAGTTCAAGCACCTTTGACAATGATTATTATTCTATCCTTCTTCAAAACAAGGGTCTATTCCAATCAGATGCTGCCCTTTTAACAGCCAAGGTCTCAAGAAACATTGTGAATGAATTGACCAAACAAGACAAGTTCTTCACAGAGTTTGGACAGTCAATGAAGAGAATGGGAGCCATTGAAGTCCTCACTGGCTCGGATGGTGAAATTAGAACAAAGTGCTCTGTTGTCAACTCTTAG 987 0.4296 IKNRMKMRAFLVACLALFCILGVCQGGNLRKKFYKLTCSQAEDIVRTKVQEHVSARPELPAKLIRLHFHDCFVRGCDGSVLLDSTASNTAEKDSIPNLSLSGFDVIDDIKAALEEKCPGTVSCADILALAARDAVSVQFNKPMWEVLTGRRDGRVSISGEALANLPAPFFNITQLRQSFESKKLTVHDLVVLSGAHTIGVGHCNLFSNRLFNFTGKGDQDPSLNPTYATLLKTKCQSLSDTTTTVEMDPDSSSTFDNDYYSILLQNKGLFQSDAALLTAKVSRNIVNELTKQDKFFTEFGQSMKRMGAIEVLTGSDGEIRTKCSVVNS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02191 328 SUPERFAMILY Heme-dependent peroxidases 29 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 Gene3D - 32 327 - -
Vimu6g02191 328 Gene3D Peroxidase, domain 2 166 306 - -
Vimu6g02191 328 ProSiteProfiles Plant heme peroxidase family profile. 28 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vimu6g02191 328 FunFam Peroxidase 32 175 - -
Vimu6g02191 328 CDD secretory_peroxidase 28 326 IPR033905 GO:0004601|GO:0042744
Vimu6g02191 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 FunFam Peroxidase 166 306 - -
Vimu6g02191 328 PANTHER PEROXIDASE 25-RELATED 17 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g02191 328 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02191 Vimu-Chr6 19256830 19258146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02191 17 328 Peroxidase AT1G05260 55.238 3.97e-117 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02191 K00430 - vum:124819628 642.499