Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02128 ATGGCGACCACTGAGTCCGAGAAGCAGGTGATTCTGATTGGAATCGACGACAGTGATTTCAGCACCAACGCTCTCCTCTGGACTCTCGATCACTTGCTATCGCCAACCCTTAATCATAACTTCAAGCTCGTTCTTGTTTATGCCAGGCCTTCTGTCTCCGCTTCGGTTGGTTTTGTTGGCCCTGGAGCCTCTGAGGTTTTGCCTATTGTCGAAGCGGATTTGAGAAGAATAGCTGCCAAAGTCACTGAAAATGCCATAGATCTATGTCACAAGAAATCCGTAAATGACGTATCAGTGGACGTGATGGAAGGTGATCCTAGGATTGTTCTTTGTGATGCTGTGGAAAAGCACCATGCTTCAATGTTGGTTGTGGGCAGTCATGGTTATGGTGCTCTAAAAAGGGCTGTTTTGGGCAGTGTAAGTGACTATTGTGCTCATCATGCACACTGCACTGTCATGATTGTGAAGAAGCCAAAGCACAAACACTGA 489 0.4663 MATTESEKQVILIGIDDSDFSTNALLWTLDHLLSPTLNHNFKLVLVYARPSVSASVGFVGPGASEVLPIVEADLRRIAAKVTENAIDLCHKKSVNDVSVDVMEGDPRIVLCDAVEKHHASMLVVGSHGYGALKRAVLGSVSDYCAHHAHCTVMIVKKPKHKH 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02128 162 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 162 - -
Vimu6g02128 162 Pfam Universal stress protein family 9 156 IPR006016 -
Vimu6g02128 162 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 158 - -
Vimu6g02128 162 CDD USP_Like 11 155 - -
Vimu6g02128 162 Gene3D HUPs 2 162 IPR014729 -
Vimu6g02128 162 PRINTS Universal stress protein signature 8 26 IPR006015 -
Vimu6g02128 162 PRINTS Universal stress protein signature 134 156 IPR006015 -
Vimu6g02128 162 PRINTS Universal stress protein signature 116 128 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02128 Vimu-Chr6 18848261 18851416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02128 - - gmx:100306046 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02128 6 18848261 18851416 Vimu6g02128 6 18848261 18851416 ECH
Vimu3g01768 3 32046285 32047337 Vimu6g02128 6 18848261 18851416 PCT