Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02123 ATGATTACTTTACCTCGTCCTATGTTTCTGTTTCTATTGTTTCTTTCACTCCTAACAGGCACTGGCCAAATGGTATTTGCAAAAGGGAAAGAGAATGTCACAGAGGCTTGCAGTGTGACAAGGTATCAAAGCCTTTGTATTCACTCTCTGTCACAATTCTCCAACACTGCTGGAAGAAGCCCTAGCAAGTGGGCACGTGCGGGAGTGTCCGTGTCAATTGGCGAGGTTAAGAATGTTAAAGCGTATCTTGCAGAATTGCAGAAGCATGGACACATGAAGGGAAGAAACAAAGTTGCCCTTTCAGATTGTGTTGAATGTTTTTCCTATGCCCTTGACGAGCTTCACAGATCACTTGGTGTGCTTAGAAGGCTAAGCAAAAGCACGTTTAGCACCCAAATGGGGGATCTCAACACGTGGATCAGTGCAGCACTCACCGATGAAGAAACTTGCCTCGAAGGGTTTGAAGGAGAAAATGAGAAGCACGTTAAAGTGCTGCAAAACCGTGTTCAGAATGTCTCTTACATCACCAGCAACGCTCTTGCTCTTGTCAATAAACTTGCCACCACAGGTCTGGGAGGAATCAACGATCCATAG 594 0.4529 MITLPRPMFLFLLFLSLLTGTGQMVFAKGKENVTEACSVTRYQSLCIHSLSQFSNTAGRSPSKWARAGVSVSIGEVKNVKAYLAELQKHGHMKGRNKVALSDCVECFSYALDELHRSLGVLRRLSKSTFSTQMGDLNTWISAALTDEETCLEGFEGENEKHVKVLQNRVQNVSYITSNALALVNKLATTGLGGINDP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02123 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 188 IPR035513 -
Vimu6g02123 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 182 - -
Vimu6g02123 197 Pfam Plant invertase/pectin methylesterase inhibitor 33 182 IPR006501 GO:0004857
Vimu6g02123 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
Vimu6g02123 197 SMART PMEI_2 28 182 IPR006501 GO:0004857
Vimu6g02123 197 CDD PMEI-like_3 36 188 - -
Vimu6g02123 197 FunFam Pectinesterase inhibitor 3 28 187 - -
Vimu6g02123 197 NCBIfam pectinesterase inhibitor domain 8 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02123 Vimu-Chr6 18824132 18824725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02123 36 191 Carbohydrate Esterase AT3G14310 33.540 2.60e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02123 - - gmx:100791264 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02123 6 18824132 18824725 Vimu6g02123 6 18824132 18824725 ECH