Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02091 ATGGATGACCTCATGAAACTTAGTTCTTTAAATGAACCTACAGTTTTATTCAACCTGCAATATGGTACAACCAAGAAAGTTCCTTTTTATGGTAATGGCTGTATTGAAGCCTACAAGTGTAAGGAAATTGAAAGCCCTCATGTTTATGCAATTACCGACACAACCATCCGAGAAATGAATCAAGACCAGATTGTTGCATACAATGCGGACATTCTTGGAGCCGATTTATCTTGTCTATCAGATATAAAAGGGAAATTCAGAGTAGCAGCGGAACCAGCTAAAGTGTTTGATGTAGGAGCAGTCCTCTCGTTTGCCAGGAGGTTGGGGAAGGGAGAGGCAAGAGTCTGTAAAAGAATTGGATTTCTTCTAGATTGTGGTTATTATATGGCCAAAAGGATTGTCAAATGCGTTTTGGCCTTAAGTCCTATTGTGAATGCAAAACGAGCGGGGCAAAAGTCCGGATCCCATTCTTTGAGTTCGCTTGTTCTTGCGATTCTATTGGATAAGAAGCCAGAAGAAGTTCCAATGTTGGTTGAATCTGTTTTGTGCAAGGTTGTAGAGGAGTTTGAACAACGAATAGCAAGCCAAGGTGAAAAGGCAAAAGTAACTTTGATTGATCCTGTTTCTCAAAGCAATCGGTCTGTTGTGGCAGATAAAAAGAAGAAGATTCACGTGGTTTCGAAAAAAGAAGATGGTATTCATAAAAGTCAAGTTAATGCTTTTATATCAAGAAAAGAGGATCACATTCATAAAAATCTAGTTGCTGATGAGGAATCGCAAAGGCAATTTCTGAAGCAGAAAATGCTCTTTGATCAGCAGCAAAGAGAAATTTCAAGCAGGAAATCAGAGCTAAGACATACCCTTCACACAACAAAATCTGGTATGCAGATCATGCAAATGCAAATGAAATTTCGTCAGGAGTTCTCCAATCTTGTTATGACAGAAGAAAATCGCAAGCTATACAATCAAGTCCAGGATCTTAAGGGTAATAAAGATCACTACTTTCTTGTTGCTTTTGGGAGTATAAAGGTATACTGTGGTGTAAGACCATTCTTTCCTGCACAATCAAACCATTTGAGCGCAGTGGAAAATATTGATGATGGAACTATCACAGGACGAAGGTCCTTCAACTTCAACAAAATCTTTGGACCATCTGCAACCCAAGCTGAAGTCTTCTTAGACATGCAGCCACTCGATAGATCTGTTCTTCATGGCTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCGGGAAAAACATACAGTATGGGATCTCTTGGACACTTTCCAGCTCTTACTGACTGCAGTAGCCGATCTCATAGGTATGGCGTATCCTATTCACCTCTTGTCATGAAAAATGTGTTTGGCAACCTTGGTGGAGACCAGCTTGTTCCATACAATGCTGACATTCTTGGAGAAATTTTACCTTGA 1434 0.3968 MDDLMKLSSLNEPTVLFNLQYGTTKKVPFYGNGCIEAYKCKEIESPHVYAITDTTIREMNQDQIVAYNADILGADLSCLSDIKGKFRVAAEPAKVFDVGAVLSFARRLGKGEARVCKRIGFLLDCGYYMAKRIVKCVLALSPIVNAKRAGQKSGSHSLSSLVLAILLDKKPEEVPMLVESVLCKVVEEFEQRIASQGEKAKVTLIDPVSQSNRSVVADKKKKIHVVSKKEDGIHKSQVNAFISRKEDHIHKNLVADEESQRQFLKQKMLFDQQQREISSRKSELRHTLHTTKSGMQIMQMQMKFRQEFSNLVMTEENRKLYNQVQDLKGNKDHYFLVAFGSIKVYCGVRPFFPAQSNHLSAVENIDDGTITGRRSFNFNKIFGPSATQAEVFLDMQPLDRSVLHGYNVCIFAYGQTGSGKTYSMGSLGHFPALTDCSSRSHRYGVSYSPLVMKNVFGNLGGDQLVPYNADILGEILP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02091 477 Gene3D Kinesin motor domain 1 72 IPR036961 -
Vimu6g02091 477 PANTHER KINESIN-LIKE PROTEIN KLP-3 157 425 IPR027640 GO:0003777|GO:0007018
Vimu6g02091 477 SMART kinesin_4 339 474 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu6g02091 477 Gene3D Kinesin motor domain 267 463 IPR036961 -
Vimu6g02091 477 Pfam Microtubule binding 316 426 IPR031852 GO:0008017
Vimu6g02091 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 316 427 IPR027417 -
Vimu6g02091 477 ProSiteProfiles Kinesin motor domain profile. 341 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02091 Vimu-Chr6 18588802 18594719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02091 294 434 Calmodulin-binding Proteins AT5G65930 30.872 1.35e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02091 K10406 - gmx:100795476 359.762