Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02090 ATGCCATTGATTGCTTTGCTGCCCTTGACTATTAATACATTGGAGATTCGAAGTAGTTCTCAAAAAGGACTCAGCGTTCCAGATGCCAGCCTTGTCCCTGTATCATCAACTATTGATGTTATTGAACTAATGAACCTTGGTCAAAGGAACCGTGCAGTTGGAGCAACAGCTCTTAGTATGGCGTATCCTATTCACCTCTTGTCATGGTATTTCTTGGACACAGCTAACAATTGTATTCTTTCAAAATATCAATTTGGCAATTGCTTGAATGTTCATGTTCAAGGAAGAGATTTGACATTTGGAGCTATCCTTCGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTGAATAAATCTGAAGCCACCGGAGATAGATTGAAAGAGGCACAACATATTTAA 408 0.4044 MPLIALLPLTINTLEIRSSSQKGLSVPDASLVPVSSTIDVIELMNLGQRNRAVGATALSMAYPIHLLSWYFLDTANNCILSKYQFGNCLNVHVQGRDLTFGAILRGCMHLVDLAGSERVNKSEATGDRLKEAQHI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02090 135 Gene3D Kinesin motor domain 6 135 IPR036961 -
Vimu6g02090 135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 135 IPR027417 -
Vimu6g02090 135 ProSiteProfiles Kinesin motor domain profile. 1 135 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu6g02090 135 PANTHER KINESIN-LIKE PROTEIN KLP-3 15 135 IPR027640 GO:0003777|GO:0007018
Vimu6g02090 135 Pfam Kinesin motor domain 12 135 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02090 Vimu-Chr6 18587555 18587987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02090 6 135 Calmodulin-binding Proteins AT5G65930 30.303 4.88e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02090 K10406 - gmx:100795476 161.384