Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02085 ATGCTAATGTATGCAGATGAAAGCCATCATCTTTCAATTGGGTCTAATATGATAGCTGCTTCTGGTGCTGGAGCTGCAACTACCATGTTCACAAATCCCCTCTGGGTTGTCAAGACTAGACTCCAAACCCAAGGAATGAGATCTGGTGTTGTGCCATATAGGGGCACACTATCCGCATTAAGGAGAATTGCACATGAGGAGGGCATTCGGGGCCTGTACAGTGGACTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATTCAATTTCCTACATACGAGACGATAAAATTTTATCTCGCAAATCAAGATGACGCAGCAATGGATAAACTTGGTGCACGTGATGTTGCAATTGCATCATCCGTTTCCAAAATTTTTGCATCCACATTAACTTATCCTCATGAGGTCGTACGTTCCAGACTTCAAGAACAAGGGCATCATTCAGAGAAACGGTACTCTGGTGTGATTGACTGTATTAGAAAGGTTTTTCAACAAGAAGGTCTATCGGGTTTTTACCGAGGTTGTGCCACGAACCTTCTGAGGACAACGCCAGCTGCTGTAATCACATTCACCAGCTTTGAAATGATACACCGTTTTCTTGTTTCTCTTTTTCCCTCTGATCCACAACCTCATATTTTGTGA 642 0.4361 MLMYADESHHLSIGSNMIAASGAGAATTMFTNPLWVVKTRLQTQGMRSGVVPYRGTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYETIKFYLANQDDAAMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVIDCIRKVFQQEGLSGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSLFPSDPQPHIL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02085 213 FunFam Mitochondrial nicotinamide adenine dinucleotide transporter 1 7 203 - -
Vimu6g02085 213 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 199 IPR018108 -
Vimu6g02085 213 Pfam Mitochondrial carrier protein 11 102 IPR018108 -
Vimu6g02085 213 Pfam Mitochondrial carrier protein 117 201 IPR018108 -
Vimu6g02085 213 SUPERFAMILY Mitochondrial carrier 5 195 IPR023395 -
Vimu6g02085 213 Gene3D Mitochondrial carrier domain 2 203 IPR023395 -
Vimu6g02085 213 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 9 203 IPR044712 GO:0006862|GO:0055085
Vimu6g02085 213 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 99 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02085 Vimu-Chr6 18566376 18568099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02085 5 207 Chloroplast and Mitochondria Gene Families AT2G47490 78.818 3.75e-113 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02085 K15115 - gmx:100500213 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02085 6 18566376 18568099 Vimu6g02085 6 18566376 18568099 ECH