Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02084 ATGTATTTGTTGTTTGGGATTGGTGTTGTGGTAGAGGAAGAATTACACGCACCATATAGAAGGAGCCAGACCGTGTCTTTCCCCTGTGCCCTAACTCTCAGGCCATGCGACTACCCTGTTCCTCCGCCACTGCCCTCTCCAGAGAGGATTCCTTTTTCATTTTCGCCACTTTCTCCCTCGATGTCGCCGCCAATGTCTGCCGACGCCCACGCCGCTAATCATATCAATCCCAAGGGCCTCCTCTGCAATGCCGCCGCCGGTGCTTCGGCCGGGGTTATTGCCGCTACATTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTTCAGGTTCACGGTGTCCCGCAAATCACCAATGGAAGTGTTAGAGGCAGCATAATAGTTGCTAGCTTGGAGCAAATTTTTCGGAAGGAAGGGTTACGTGGAATGTATCGAGGGCTTGCGCCCACTGTGCTGGCTTTACTTCCAAATTGGGCGGTTGATATAAACGAAGGATCATGTTTTATCTCTGACAAGCAGGGGTATGAAGTCATTCGTGAGAAACTACAACGTCATTGTGACCTTGACCTCATATCAACCAACCTCCATTTTTATGGCTTGTTCAGGCTGATGACTTACAGGGCTGCACACTGCTATGCAAATGAGAATTAG 648 0.4907 MYLLFGIGVVVEEELHAPYRRSQTVSFPCALTLRPCDYPVPPPLPSPERIPFSFSPLSPSMSPPMSADAHAANHINPKGLLCNAAAGASAGVIAATFVCPLDVIKTRFQVHGVPQITNGSVRGSIIVASLEQIFRKEGLRGMYRGLAPTVLALLPNWAVDINEGSCFISDKQGYEVIREKLQRHCDLDLISTNLHFYGLFRLMTYRAAHCYANEN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02084 215 Gene3D Mitochondrial carrier domain 58 203 IPR023395 -
Vimu6g02084 215 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 81 159 IPR044712 GO:0006862|GO:0055085
Vimu6g02084 215 ProSiteProfiles Solute carrier (Solcar) repeat profile. 78 170 IPR018108 -
Vimu6g02084 215 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 66 163 - -
Vimu6g02084 215 SUPERFAMILY Mitochondrial carrier 79 159 IPR023395 -
Vimu6g02084 215 Pfam Mitochondrial carrier protein 79 160 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02084 Vimu-Chr6 18564271 18565646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02084 65 159 Chloroplast and Mitochondria Gene Families AT2G47490 67.368 1.35e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02084 K15115 - gmx:100500213 170.244