Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02025 ATGGAAGAAACATTTGTACCCTTTGAAGGAATCAAGAATGACCTGAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGACGGGTGGATTCAAAGCAGGTTTAAGGATTTGGGCGCCCACCACATACATATTCTTTGCTTCGGCAATACCGGTCATTTCATTCGGGGAACAACTAGAGCGAGATACTGACGGTGTTCTAACTGCTGTTCAAACATTGGCATCTACTTCAATATGTGGCATCATACACTCAATCCTTGGAGGTCAACCCCTGCTGATTTTAGGAGTGGCAGAACCTACCGTGATCATGTACACATTCATGTTCAATTTTGCAAAAGAGAGACCAGAGTTGGGCCGGGATTTGTTTCTGGCATGGACTGGATGGGTATGTGTCTGGACTGCAGTGTTGCTATTCCTGCTGGCCATCTTGGGAGCTTGCTCTATAATCAACAGGTTTACCCGTATTGCAGGAGAGTTATTTGGCATGCTTATTGCAATGCTCTTCATGCAGCAAGCTATCAAAGGACTCGTTGACGAGTTTCGCATACCACAACGAGAAAATCCAAAATCAATTCAGTTCATACCTTCATGGAGTCCTTTCATTTGGCCTTCTCCTCACTGCATTAAGAAGCAGAAAGGCCAGGTCATGGCGCTATGGTACTGCCTAATAGCAGACTATGGTGTGCCACTTATGGTCCTAGTTTGGACAGGTGTATCCTACCTGCCTTCTGGAAGTGTTCCACATGGTATTCCAAGGCGCCTGTTCAGCCCGAATCCATGGTCACCGGGTGCATATGAGAATTGGACTGTTGATATGGTCCATGTTCCTGTTGTCTACATAATTGGAGCATTTATCCCAGCCACTATGATTGCTTGTAGCATCCCAGCTTTCCCAGCAGAAGGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTACGACTTGCTCCTTTTGGGATTTTTGGGAAGACCTTAATGTGTGGCCTTATTGGAATTCCTCCAGCAAATGGAGTGATACCACAGTCTCCAATGCACACAAAGAGTCTGGCAACTCTTAAACATCAGTTGCTTCGGAACAAACTGGTGGTAACCGCACGAAAAAGTATGGGAAAGAATGCTAGTTTAGGACAGTTATATGGCAACATGGTAGAAGTATACCATCAAATGCAGACGCCTCTTATTTACCAGGATCCCTCTGCTCGAGCACAAGGACTAAAAGAACTTAAAGAATCAACTATTCAAGCAGCTACCAGTATGGGAAACATGGATGCCCCAGTTGATGAGACTATATTTGACGTTGAAAAAGAAATAGATGATTTGCTGCCTGTGGAGGTTAAGGAACAGCGTCTGAGTAACTTGCTTCAAGCAATAATGGTGGGAGGATGCGTTGCAGCCATGCCTGTCCTCAAGAAAATACCAACCTCAGTCCTTTGGGGCTATTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAACCAATTCTGGGAAAGGATCTTATTGCTCTTCACTGCACCAAGCAGAAGATACAAGGTTCTTGAGGATTACCATGCTACTTTTGTAGAAACTGTTCCTTTCAAAACAATAGCAACATTCACCATTTTCCAAACCATTTACCTTCTTGTATGTTTTGGACTAACATGGGTTCCTATTGCCGGGGTCATGTTCCCCATGATGATCATGCTCTTAGTTCCGGGGGCACACCTTCAAGACTTGGATGCAGCAGCGTATGAAGAGCAAACAGCTTTGCCATTCAACCTTGCAACACAATCAGAGTTTGGAGGTGGTGCTTCTCATGTTGGAGAAGGTGAGATACTAGATGAAGTTATCACAAGAAGCCGTGGCGAGTTTAGGCACACTAGCAGTCCAAAGATCACAAGCTCCACCCCAACACCAAAAACTGATCCCAGAAGCCATCTAAGCCCACGCCTCTCGTTTAGTTCACGAGTGGGTGAACTGAAAACTGAGCAAAGTCCTCGATCTGGTGCAAGAGGTCCCCTCAGTCCAAAGGCTGGAGAAGTGAGACTATCAAATCTGGGAAGAACTCCTCTTAATCAGGATTCAAAACAGCAGGACCACAATTAA 2076 0.4504 MEETFVPFEGIKNDLRGRLMCYKQDWTGGFKAGLRIWAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTSICGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRDLFLAWTGWVCVWTAVLLFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPQRENPKSIQFIPSWSPFIWPSPHCIKKQKGQVMALWYCLIADYGVPLMVLVWTGVSYLPSGSVPHGIPRRLFSPNPWSPGAYENWTVDMVHVPVVYIIGAFIPATMIACSIPAFPAEGVQFEKAIFLPLRLAPFGIFGKTLMCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVVTARKSMGKNASLGQLYGNMVEVYHQMQTPLIYQDPSARAQGLKELKESTIQAATSMGNMDAPVDETIFDVEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLVCFGLTWVPIAGVMFPMMIMLLVPGAHLQDLDAAAYEEQTALPFNLATQSEFGGGASHVGEGEILDEVITRSRGEFRHTSSPKITSSTPTPKTDPRSHLSPRLSFSSRVGELKTEQSPRSGARGPLSPKAGEVRLSNLGRTPLNQDSKQQDHN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02025 691 MobiDBLite consensus disorder prediction 609 691 - -
Vimu6g02025 691 PANTHER ANION EXCHANGE PROTEIN 221 577 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vimu6g02025 691 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vimu6g02025 691 Pfam HCO3- transporter family 441 531 IPR011531 GO:0006820|GO:0016020
Vimu6g02025 691 MobiDBLite consensus disorder prediction 617 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02025 Vimu-Chr6 18117396 18122086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02025 1 662 Antiporters AT3G62270 71.511 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02025 K24194 - gmx:100776705 1164.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02025 6 18117396 18122086 Vimu6g02025 6 18117396 18122086 ECH