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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vimu6g02008
ATGTCTGGGAAAATAGTTGTCTCCGTTGTTTCTCTCATTCTTGTGGTAGGTGTTGCAATCGGTGTTGTGGTTACCGTTAATAAGAAGGGTGAGGAATCCTCCATCCACTCCGATCAAAAATCCGTTGAGATTATTTGTCAAAACACTGATGACAAAAACCTTTGCCACAACACTCTCAGCTCCGTTAAGGGTCTTGACGCCGCTGACCCTAAGGCTTACATTGTCACGGCAGTGAAAGCCACCATGGACAGCGTCATCAGAGCGTTCAACATGAGTGACAGGCTCGCCACCGAGCACGCAGACAAAGACAACGGCACAAAAATGGCCATTGATGATTGCAAGGACTTATTACAATCAGCCATCCAAAGTCTTCAACTCAGCACTGACATGGTGCAAAATAACAACATCCATGCCGTGCATGACCAAAGTGCTGATTTCAAGAACTGGCTTAGTGCAGTTATCTCATACCAACAGGCGTGCATGGAAGGATTCGACGATGGCAAAGAAGGTGAGAAGAATATCAAGCAGCAGTTCCAAACAGAGAGCTTAGACAAAGTGCAAAAACTCACTGCCATCACCCTTGATATCGTGAGTGGTTTATCACACATCCTCGAAAAATTTGGGTTGAAGCTAAACCTTAAACCCGCCTCCCGTCGTCTTCTCAGTAAGGACGGGTACCCCACTTGGTTCTCTGCCTCAGATCGCAAGCTCTTGGCTCAACTTGGACGTAAAGGATGGAGATCACACATCACACCTAATGTTGTAGTTGCCCAAGATGGCTCTGGTCAGTTTAAAACCATTGCCGAGGCAATTGCTTCTTACCCCAACAACTTCCAAGGTAGATATAACATCTATGTTAAGGCTGGTGTCTATGATGAATACATCACTGTTCCTAAAAACGCCGTCAATATTCTCCTCTATGGTGATGGCCCTGGAAAAACCATTGTCACTGGTCACAAGAACTTCCGCGATGGTGTGAAGACAATGCAAACTGCCACTTTTGCCAACACTGCTCAGGGATTCATTGCCAAGGCAATGACATTCGAAAACACTGTTGGAGCTGACGGACACCAAGCTGTGGCTTTTAGGAACCAAGGAGACATGTCAGCAATTATTGGCTGCCACATTTTGGGTTACCAAGACACCTTGTATGCCCAAACCAACAGGCAATTCTATCGCAACTGTGTCATCTCTGGCACCATTGACTTCATCTTTGGCACCTCACCCACTGTGATCCAACACTCTGTCATCGTCGTCAGGAAGCCCCTTGACAACCAATTAAACACCATTACTGCAGACGGCACATCCGAGAAGAACATGAACACTGGAATCGTTATCCAGGATTGCGAGATTGTGCCCGAAGCTGAGCTCTTCCCAGTGAGGTTCCAGATTAAGTCATACTTGGGCAGGCCATGGAAGCAGTACTCAAGGACTGTGGTGATGGAATCCACCATCGGTGACTTCCTTCACCCTGAAGGATGGTGCCCTTGGGCAGGCGAATACTTTGAAGACACCTTGTACTACGCTGAGTACAACAATGTTGGACCTGGTGCCGCGGTGGAGGGAAGAATCAAGTGGAAGGGTTATCATGGTCTCATTTCTCGCGAAGAAGCTGCCCAGTTCACCCCTGGCCAATTCCTCCAGGCTGGAGTTGGCTCTGGAGCCGATTGGTTGAAAGCTCTTCATGTTCCTCATGCCCTTGACTTCGTCAAACCTTAA
1719
0.4764
MSGKIVVSVVSLILVVGVAIGVVVTVNKKGEESSIHSDQKSVEIICQNTDDKNLCHNTLSSVKGLDAADPKAYIVTAVKATMDSVIRAFNMSDRLATEHADKDNGTKMAIDDCKDLLQSAIQSLQLSTDMVQNNNIHAVHDQSADFKNWLSAVISYQQACMEGFDDGKEGEKNIKQQFQTESLDKVQKLTAITLDIVSGLSHILEKFGLKLNLKPASRRLLSKDGYPTWFSASDRKLLAQLGRKGWRSHITPNVVVAQDGSGQFKTIAEAIASYPNNFQGRYNIYVKAGVYDEYITVPKNAVNILLYGDGPGKTIVTGHKNFRDGVKTMQTATFANTAQGFIAKAMTFENTVGADGHQAVAFRNQGDMSAIIGCHILGYQDTLYAQTNRQFYRNCVISGTIDFIFGTSPTVIQHSVIVVRKPLDNQLNTITADGTSEKNMNTGIVIQDCEIVPEAELFPVRFQIKSYLGRPWKQYSRTVVMESTIGDFLHPEGWCPWAGEYFEDTLYYAEYNNVGPGAAVEGRIKWKGYHGLISREEAAQFTPGQFLQAGVGSGADWLKALHVPHALDFVKP
572
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vimu6g02008
572
SMART
PMEI_2
37
196
IPR006501
GO:0004857
Vimu6g02008
572
FunFam
Pectinesterase
38
201
-
-
Vimu6g02008
572
SUPERFAMILY
Plant invertase/pectin methylesterase inhibitor
40
200
IPR035513
-
Vimu6g02008
572
Pfam
Pectinesterase
253
549
IPR000070
GO:0030599|GO:0042545
Vimu6g02008
572
SUPERFAMILY
Pectin lyase-like
250
551
IPR011050
-
Vimu6g02008
572
CDD
PMEI-like_3
45
201
-
-
Vimu6g02008
572
ProSitePatterns
Pectinesterase signature 2.
397
406
IPR033131
-
Vimu6g02008
572
PANTHER
PECTINESTERASE
15
559
-
-
Vimu6g02008
572
Pfam
Plant invertase/pectin methylesterase inhibitor
41
196
IPR006501
GO:0004857
Vimu6g02008
572
Gene3D
Invertase/pectin methylesterase inhibitor family protein
38
201
IPR035513
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vimu6g02008
Vimu-Chr6
17982604
17984322
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vimu6g02008
5
565
Carbohydrate Esterase
AT3G05610
39.506
4.42e-137
412
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vimu6g02008
K01051
-
gmx:100781507
944.88
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