Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01914 ATGCAAGACGAAGAAGCATCTAGTTTTTCCCAGATAAGCGAATCTGTATCACTTGAAAGTGAGGTGAAGGGACCAGAGCAAAGCCCTTCCATATCGGGGGATGAAAATATGACCATCAAACAAATAAGTGGGATATTTAGTTCAGTTGATTTTAAAAGATCAAGTAACACAGAACTTGAATATGTACAGGATATTCTCGGTAATGCAGAGTTTATGGCAGAAGAATTTGCCATGGGTCAAACTAGTGCAGTCATTATGCCAAATTTATTTGAACTGTTGGAGAATCAGAATAGTAGAACAGAAAACTACGGAGAAGAGTACTCTAAACTTGAAAGGAAGGCTATATTTGATTGTGTTAGCGAGTTCCTGGAGTTAAGATGTAAGCAAGCTTTCATTGGAACGTGCAAAGTGTGGCCTGGGTGGATGATGGCAGTTCAGAGGAAGAGCTGGATGGCAGAGGAACTGTATAAGGAGATGCTGAGTTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTCACAAAGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGGGACATACTAGCTTATTTGATTAATGAATTAGTTTCAGATTTGTTACCAGTCTAA 657 0.4018 MQDEEASSFSQISESVSLESEVKGPEQSPSISGDENMTIKQISGIFSSVDFKRSSNTELEYVQDILGNAEFMAEEFAMGQTSAVIMPNLFELLENQNSRTENYGEEYSKLERKAIFDCVSEFLELRCKQAFIGTCKVWPGWMMAVQRKSWMAEELYKEMLSFRSMEEVMVDELVTKDMSSGCGKWLDFDVEAFEEGLEVEGDILAYLINELVSDLLPV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01914 218 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 11 214 - -
Vimu6g01914 218 Coils Coil 93 113 - -
Vimu6g01914 218 MobiDBLite consensus disorder prediction 1 34 - -
Vimu6g01914 218 Pfam Domain of unknown function (DUF4378) 58 210 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01914 Vimu-Chr6 17262089 17262745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01914 58 216 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 40.994 1.44e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01914 - - gmx:100804688 354.755