Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01911 ATGTACCTAGTTAATGAGGCTGGCATATCCGGAGCCAAACGCTTTAAGTTGTGCTTTCTTAATAAGTTACCCAAGACAATTTATACTCGGTCTAATATAAAAGCAGAAGACGAATCACTTCTTCAAATTGCTCTATTTGATGTTAGAACCAAGTCTGTAGTAAAGGAGGGTCCTCTTTCCTCGCTAAAGATAGAGATCTGTGTTCTGAATGGTGAGTTCGGATCCGATGGCAGTGAGGAGTGGACAGAAGAGGAGTTCAAGTCCAACATCTCACGTGAAAGAGAAGGTAGAGAGCCACTTTTGATTGGAGAGAGGTTTATTACTCTTAAAAATGGAGCTGCTTGTATCACTAAAATTGCCATATCTGACAACTCGAGATGGCAAAGAAGCAGAAGGTTCAGGATTGGAGTTAAATGTGTGCCACCAACTTCCATTGGAGAAAAGATTCAGGAGGGTAGAAGTGAGCCTGTTATTGTGAAAGATAACAGGGGAGAGTGTGAGTCTTATTAG 510 0.4137 MYLVNEAGISGAKRFKLCFLNKLPKTIYTRSNIKAEDESLLQIALFDVRTKSVVKEGPLSSLKIEICVLNGEFGSDGSEEWTEEEFKSNISREREGREPLLIGERFITLKNGAACITKIAISDNSRWQRSRRFRIGVKCVPPTSIGEKIQEGRSEPVIVKDNRGECESY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01911 169 PANTHER OS02G0177800 PROTEIN 12 165 IPR012416 GO:0005516
Vimu6g01911 169 Pfam Calmodulin binding protein-like N-terminal domain 15 162 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01911 Vimu-Chr6 17246406 17247438 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01911 10 165 Calmodulin-binding Proteins AT5G26920 46.497 7.60e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01911 - - pvu:PHAVU_001G226000g 295.819