Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01908 ATGGCCAATCTCACAGCTGAGGACGGTGGTTCACTTGAAATTGAGCTGCGGGATGCTGCATCGCAGCAACGCGTTGACACAGAGGAACTTTCCAGCATGAAGGCTCAGATCTATGTGCTGGATGGTGCTTTTGAAAGTCAGGACTGGACTGCAGAGGAATTTGATGGCAACATTGTGAAACCAAGAGCGGGAAAGGCACCATTACTCAAAGGACAAACGGTTATTAAAATTGAAAAAGGGGTTGCGGCCAGGAAATCCGAGCGTCCAGCCTTGAACGATGAAGTATGGCGTCTGAGGAACATTGGAAAAGCGGGTGAGCTTCGCAAGCAGCTTTCCCAGAATAGAATAAAGACTGTGAAGGATCTTTTGCGGTGGGACACAATCGGTTTATTACGGAAGAAATTCAACAAGATTAATACATGGGACAAAATCATTGAACATGCTAAAGAATGTGAACTAGATGATTATGAGCGCTACTTGTATACGTATGGTGCCATGGAACCAGAGAAATCTGTTTCCCTTGTCTTTAACTGCATCTATGAGCTTGTGGAGGTCATTATTAAGGGGCAGCCTCGTTCTCTGCAATCTCTGAATTCGGAGGAGGAGCGTTTTGTGGGAAAAATCAAGGAGCAAGCATACGCAAATCGGGAGCATCTCGAGCCAATTGCTGCCACACCAACAACATATGAAATAGTGTCGAAGTTAACAGGTACACAGGCGGTGTCATACAGTGCTCCATATCAAGGTCTGCAACTCCCTGATCACCAAGGTATTGTATCTGTCTTCTCTTTTGTTTTTTATGACACTCAAATATAA 816 0.4485 MANLTAEDGGSLEIELRDAASQQRVDTEELSSMKAQIYVLDGAFESQDWTAEEFDGNIVKPRAGKAPLLKGQTVIKIEKGVAARKSERPALNDEVWRLRNIGKAGELRKQLSQNRIKTVKDLLRWDTIGLLRKKFNKINTWDKIIEHAKECELDDYERYLYTYGAMEPEKSVSLVFNCIYELVEVIIKGQPRSLQSLNSEEERFVGKIKEQAYANREHLEPIAATPTTYEIVSKLTGTQAVSYSAPYQGLQLPDHQGIVSVFSFVFYDTQI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01908 271 PANTHER OS02G0177800 PROTEIN 3 82 IPR012416 GO:0005516
Vimu6g01908 271 Pfam Calmodulin binding protein C-terminal domain 160 221 IPR046829 -
Vimu6g01908 271 Pfam Calmodulin binding protein central domain 90 151 IPR046830 -
Vimu6g01908 271 Pfam Calmodulin binding protein-like N-terminal domain 3 83 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01908 Vimu-Chr6 17239461 17240818 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01908 2 267 Calmodulin-binding Proteins AT5G26920 28.308 8.76e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01908 - - vra:106757360 315.464