LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu6g01906	ATGAAGAATTTTCTCACGATCAATCAAAGCAGCAGCTTCTGCGCAGTATCTGATTTTATTGCTGTTCTTGACGTCTTTGTCTTGAAGCCGATGGAATCAAAAAGACAATCCCAAGAGGAGGACAAAAGGGGTGATCAAAAGCGGAGTCGTCAGAATTCACAACTATGGGAAATATTGCTCATTACAAGGTATCTGCCTCTCATTTGGAATGAGCCCTACTTGGAAGATTTTATTCGAAATACTATCCGAGAGGTGGTTGAACTCCAACTACCAAGACTAACAAGTAGTATTCAGACTGAAATATCTGGAGGCCGCAGATTCTTGAAGCTGGTGTTTAGGAATGAATTGGCTGATACAATTTATACTATGTCCAAGTTGAAAGCTAGAGACAACAATCCTCTTGAGGTCGTTCTTTTCGATACTAAATCTCAGTCTATAGTCTCTGATGAGAATGATCCACTGTCATCGATCAAGGTAGAGATTTGCGCCCTTGATGGTGAGTTTGGTTCAGATGGCAGTGAAAATTGGAGCAAAGATGAATTCAAATCCAAAATCTTACATCAAAGAAAGAATAAAGGCCAGTTACTGAAAGGTGATACGGTTTTTGCGCTTAAAAATGGAGTAGGTTTTATCCACAATGAATTCACTGACAACTCATGTTGGATAAGAACACAACGTTTCAGATTAGGAGTGATGGTTGCGAAATCAAATATGAATGACGCATTAATCATCAGGGAAGGTATAAGTAAACCTTTTATTGTCAAGGACTACAGAGGTGAGTGTAAATTAACTTCGAATTTATTCGCTCTTTCTGAGGACGGGATACTCACTGTTGGGGATTTTTTTTTGAAGGAGCATGAAACCAATCCATTATCTTTGGAAGAGAAACTCGGCAAGATTTCCTCCAAAAGACAACGGGAAGAAATATATAAGCAGGCTAACAAAGCAAAGCATGCTGAGACTGGTGTTGCTGAAACCATATTATTTAAAGGACAAAATTATCTGTCAGAGAATAATACTTTCAACTCCGATCAGATGCAAACATGTCAAAGTTCGAGGGGTCTGATGCAGATTGAGCTGATAAATGGTGCTCCAGATCAAGATGTACAACGGCCTGACTTTCCAATTGCTCAGCAAGAAGAAAGTCTTTCCCGAAGGGGCATAGAAGACTGGTTTAATGAATTATCACAGAATGATGAGTTTGATCTACTCATAAACCCTTTGCTCCCTCCATGTAATAATGATGAAGCAGAACCTGACAGAACCGTAATTTGTATTGATCAAACAAAGGGCAAAGCAAGATGA	1305	0.3923	MKNFLTINQSSSFCAVSDFIAVLDVFVLKPMESKRQSQEEDKRGDQKRSRQNSQLWEILLITRYLPLIWNEPYLEDFIRNTIREVVELQLPRLTSSIQTEISGGRRFLKLVFRNELADTIYTMSKLKARDNNPLEVVLFDTKSQSIVSDENDPLSSIKVEICALDGEFGSDGSENWSKDEFKSKILHQRKNKGQLLKGDTVFALKNGVGFIHNEFTDNSCWIRTQRFRLGVMVAKSNMNDALIIREGISKPFIVKDYRGECKLTSNLFALSEDGILTVGDFFLKEHETNPLSLEEKLGKISSKRQREEIYKQANKAKHAETGVAETILFKGQNYLSENNTFNSDQMQTCQSSRGLMQIELINGAPDQDVQRPDFPIAQQEESLSRRGIEDWFNELSQNDEFDLLINPLLPPCNNDEAEPDRTVICIDQTKGKAR	434

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu6g01906	434	PANTHER	OS02G0177800 PROTEIN	64	318	IPR012416	GO:0005516
	Vimu6g01906	434	Pfam	Calmodulin binding protein-like N-terminal domain	108	256	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu6g01906	Vimu-Chr6	17232744	17238318	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu6g01906	74	329	Calmodulin-binding Proteins	AT2G24300	32.281	7.48e-29	117

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu6g01906	-		-	vra:106757518	669.077