Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01905 ATGTTTCGTCGATTTTGCCATAACCATCAGGGTGGCAGTTCTGGAAGAAGAGCTAATTACCAATTGTGCTTCGTCAATGAATTGCCTCAAGTAATTTTCACCATGGCCAATCTCACAGCTGAGGACGGTGGTTCACTTGAAATTGAGCTGCGGGATGCTGCATCCCAGAAACGCGTTGACACAGAGGAATTTTCCAGCATGGAGGCTCAGATCTATGTGCTGGATGGTGCTTTTGAAAGCCAGGACTGGACTGCAGAGGAATTTGATGGCAACGTTGTGAAACCAAGAGAGGGGAAGGGAAAATTACTCAAAGGAAAAACGGTTATTAAAATTGAAAAAGGGGTTGGTCTTATCGATAAGAAATGTCTTCAGATTACTGATATTTCTAGCAACACAACAAACAAAACGTTTCGGTTGGGAGTTAAAATCCTGGGATCTAACTCCCTTGGAGCAGGAATCAGGGAAGCCATAAGCGAACCCTTCAGGGTCAAGGATAAACGTGGAGAGTGTAAGTCCTTAACCATAACTCATTTTCGTATTTTTTTCGTAAATAATGTTTTAAATATTTTAATTTTCGATGTGTATTTGATTATTTCAGCAACCAAGAAATCCAAGCGTCCAGCCTTGAACGATAAAGTATGGCGTCTGAGGAACATTGGAAAAACGGGTAAGCTTTGCGAGCAGCTTTCCGAGAATGGAATAGAGGATGTGAAGCAACTTTTGCGATGGAACACAACCGGTTTGTTACGGACGGTAAATAAAACTTTGGTCCTCATAATTAAAAAAAGTTTTAAAAACTTAAAAATAATAAGAGAATAA 819 0.4017 MFRRFCHNHQGGSSGRRANYQLCFVNELPQVIFTMANLTAEDGGSLEIELRDAASQKRVDTEEFSSMEAQIYVLDGAFESQDWTAEEFDGNVVKPREGKGKLLKGKTVIKIEKGVGLIDKKCLQITDISSNTTNKTFRLGVKILGSNSLGAGIREAISEPFRVKDKRGECKSLTITHFRIFFVNNVLNILIFDVYLIISATKKSKRPALNDKVWRLRNIGKTGKLCEQLSENGIEDVKQLLRWNTTGLLRTVNKTLVLIIKKSFKNLKIIRE 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01905 272 PANTHER OS02G0177800 PROTEIN 15 243 IPR012416 GO:0005516
Vimu6g01905 272 Pfam Calmodulin binding protein central domain 208 246 IPR046830 -
Vimu6g01905 272 Pfam Calmodulin binding protein-like N-terminal domain 20 166 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01905 Vimu-Chr6 17229503 17230483 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01905 17 254 Calmodulin-binding Proteins AT5G26920 34.874 1.15e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01905 - - vra:106757360 340.887