Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01891 ATGACGGAGACATTACCTGCATGTTACAACGTATCTATAGTTAGTCCTAATCAATTTTGGAAAACTGATAAAGTCTCGAAAACAGAGCTCCCTATTCTAGCCTTTCAAATTGCTTTTGTTGCCGTGTTATCTTGTCTCTTTTCCACAATTTACAAACATCTACATCAAACTCGTCTCATTTCACAAATCTCTGTTGGTTTCCTACTAACACCACCATTACTTGGAAGATTCACGCCCATTTTTGAGTTCATTTTTCCAGTAAATGGGATTGTCAATGTCGAGGTTCTTTCCCATATTGGCCTCATTTATTATGCATTCCTTAGTGGATTGGAGATGAACTTAAATACCATTTTACACATGAAAAAGAAACCTGCAACGATCACTATTGTTGGGATTATCTTTCCCATACTTGTTGCACCATGCTTATATGCTTTGTTTCGAAAAGTTTATGGGCATACTATGATGTTTCCCCTTGAGGAAAGTACAAATAATACGTATATACTTTGGAGTTTAATTCTCACTGTTACAAGTTTTCCTGTGGTAGCACACACGCTTTCTGAGCTTAAGCTCCTTTATACTGGTCTTGGTAAAGCGGCTTTAACAGCAGCTATGATTGGTGACACCTATGGTTGGATTCTTTTCACTTTATTTGTTCCATTTTCAACTAATGGTAAAGGAGCTATTTACACTGTGCCATGCACGCTAATCTTCATTGTTGTGTGCATATTTGTGGTACGTCCAATCATTCAATGGTTTATTGATCGCAAGGCAGACAAAGATGAATGGAATGATAATCAATTGCTTTTTATAATCATGGGGGTTTTAGCTTGCTCATGTATTTCAGATTTTCTTGGTGCACATGCCATTGTTGGAGCTTTTGTTTTTGGATTAATTTTACCCCATGGAAGATTTGCTGAATTGGTCATGTCAATTTCAGATGATTTTGTTGGAGGATTTTTAGTTCCCCTCTTCTTTACTGGAACTGGGATGAGACTTATGTTGGCTGCAATTTTCTCCCAACAAAGTTGGCCCTTTATAGTTGTGATTATACTCTTATTGTGTGCTCTAAAAATTTTAAGCACTTTAATTGTCACCTTGTTCTTCGGTATGCGTATTCGAGATGGTTTAACCTTGGGCTTGATTTTGAATAATAAAGGCGCCATGGCATTAATAATGCTGAACATTGCTTGGGATAGAACGATATTTTCAGTACCTACTTATGCCGTTATAACTTCAGCTGTTCTTCTGATGACCATAGTTGTGTCTCCCATTATAAATGTTGTCTACAAGCCAAGACAAAGATTTGAACAAAACAAGCTAAAGACCATACAAAAACTAAGAGTTGATGCAGAGCTTCGAATTATATCATGTGTTCACAATACTCGCCAAGCTGCAAGCATGATTAGCATAGTTGAGTGTTTTAATGCCACGAGAGTTTCCCCTATCCATGTTTTTGCCTTGTACCTTGTTGAACTTACTGGACGAGCTGCCGCCCTAGTTGCTGCACATATAGGGAAGCCTAGCAGCCAACCCGGAGAACAAAACCTAACTAGGTCACAAGAAGAGTTAGAAAGCATTCACAATGCATTTGATGCCCTTGGAGAGGCATATGACGCTATTAGAGTTGAGACCTTAAATGTGGTGTCATCATATACAACAATTCATGAGGACATATATCACTCAGCAGATGAGAAACGCACAAGCTTGATTCTTCTTCCATTTCATAAACAATTAACTTTAGAAGGTACTCTAGAAGTAACAAGTGTTATATACAAAGATATAAATCAAAATGTAATGCAAGGTGCTCCATGCTCTGTGGGAATATTTGTTGATCATGATTTTGGGTTAGTTCCTAAAAGGAACCTTCATGTTCGTGTGGTATTTGTTGGGGGTCCTGATGATCGTGAAGCCTTGGCCATTGCATGGAGGATGGCAGGATGTTCAGGAACACAACTCTCAGTGGTTCGAATTCTTCTATTGGGTGAAGCGGCAGAAGCAGAAGCAGATGCATCAGTTCATGATGAAACACAAGGGATATTATCTGCAGTAATAGATACAGAGAAGCAAAAAGAGTTAGATGATGAGTATATAAACACATTCAGACTTACCGGGGTTCACAATAACGATTCAATATCCTACTCAGAGATTGATGTTCACAGTGGTGAAGATATTCCTGCAATCCTAAATGAGATAGAAAAATTTGGTTGTGATCTTTACATAGTTGGACAAGGAAATTGTAGGAACTCTAAGGTCTTCTCAAATTTGCTAGAATGGTGTGAGTGCTTAGAACTTGGAGTTATAGGGGACATTTTAGTGTCAAACAATTTTGGTTCACGTTCTTCTGTGCTAGTTGTTCAACAATATGGATATGGAGGAATAGATTTTAGAAATAATCTTAACAAAAAAGACACTAACAATGACATGTTTAAGTCTATTGTTTGA 2442 0.3771 MTETLPACYNVSIVSPNQFWKTDKVSKTELPILAFQIAFVAVLSCLFSTIYKHLHQTRLISQISVGFLLTPPLLGRFTPIFEFIFPVNGIVNVEVLSHIGLIYYAFLSGLEMNLNTILHMKKKPATITIVGIIFPILVAPCLYALFRKVYGHTMMFPLEESTNNTYILWSLILTVTSFPVVAHTLSELKLLYTGLGKAALTAAMIGDTYGWILFTLFVPFSTNGKGAIYTVPCTLIFIVVCIFVVRPIIQWFIDRKADKDEWNDNQLLFIIMGVLACSCISDFLGAHAIVGAFVFGLILPHGRFAELVMSISDDFVGGFLVPLFFTGTGMRLMLAAIFSQQSWPFIVVIILLLCALKILSTLIVTLFFGMRIRDGLTLGLILNNKGAMALIMLNIAWDRTIFSVPTYAVITSAVLLMTIVVSPIINVVYKPRQRFEQNKLKTIQKLRVDAELRIISCVHNTRQAASMISIVECFNATRVSPIHVFALYLVELTGRAAALVAAHIGKPSSQPGEQNLTRSQEELESIHNAFDALGEAYDAIRVETLNVVSSYTTIHEDIYHSADEKRTSLILLPFHKQLTLEGTLEVTSVIYKDINQNVMQGAPCSVGIFVDHDFGLVPKRNLHVRVVFVGGPDDREALAIAWRMAGCSGTQLSVVRILLLGEAAEAEADASVHDETQGILSAVIDTEKQKELDDEYINTFRLTGVHNNDSISYSEIDVHSGEDIPAILNEIEKFGCDLYIVGQGNCRNSKVFSNLLEWCECLELGVIGDILVSNNFGSRSSVLVVQQYGYGGIDFRNNLNKKDTNNDMFKSIV 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01891 813 Gene3D - 482 747 - -
Vimu6g01891 813 PANTHER CATION/H + ANTIPORTER 12 788 - -
Vimu6g01891 813 Pfam Sodium/hydrogen exchanger family 39 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu6g01891 813 Gene3D - 32 439 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01891 Vimu-Chr6 17114983 17117625 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01891 8 788 Antiporter Super Family AT2G13620 37.468 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01891 - - gmx:100800072 1266.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01891 6 17114983 17117625 Vimu6g01891 6 17114983 17117625 ECH