Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01783 ATGCAGAGCTACATTGTCTACACTGGCAATTCCATGAAGGATGAGGATTCTGCGTTGGCTCTTTATTCGAACATACTACAAGAAGTTGCAGACAGCAATGCCGAGCCCAAGTCAGTGCAGCAACACTACAAACGAAGTTTCGGTGGCTTTGTTGCTAAGCTAACGGAAGAGGAAGCCAATAGATTGGCTAGGCATGAAAGAGTGGTAGCTGTCTTTCCCAATCAAAAGAAGCAACTCCATACAACAAGGTCATGGGATTTTATTGGCTTTCCACTAAACGTAGACAGAGCAAAAACTGAGAGTGATGTCATCATTGGAGTGCTTGACTCTGGAATCTGGCCAGAATCTAAGAGCTTCAGTGACGAAGGATTCGGTCCACCACCTAGTAAATGGAAGGGCACTTGCCAAAGTTCTAAAAATTTCACGTGCAACAATAAAATCATTGGGGCTAAGATTTACAAAGCTGATGGATTCTTTACCGATGACGACCCAAAATCTCCGTTAGACGTAGATGGTCATGGCACTCATACAGCATCGATAGCAGCAGGGAATCCAGTTAGTCAAGCAAGCATGTTAGGCCTTGCTCAGGGAACGGCAAGAGGTGGCGCGATAAAAGCGCGCATTGCTGTGTATAAAGTGTGTTGGTTATTTGATGGTTGTTCTGATGCAGACATACTTGCTGCATTTGATGATGCAATTGCGGATGGGGTTGATATAATATCAGTTTCTCTTGGAGGTTTCAGTGACGAAAACTACTTTAGAGATGGAATTGGCATCGGAGCATTTCATGCTGTGAGCAAAGGAGTGTTGACAGTAACTTCAGCAGGGAACAATGGTCCTAAGTATTCCTCCCTGTCCAATTTTTTGCCTTGGTCAATTACTGTGGCTGCGACTACCATAGACAGAAAGTTTGTTACCAAGGTTGGATTAGGTAACAACATTACCTATGAGGGTACCTCGATAAATACATTTGACCTCAAGGGAGTGTTGTATCCTATAATCTATGGTGGAGATGCACCAAGCAAAGGCTCCGATTCATCGTCATCAAGGTTTTGCTTCATCGGTTCGTTGGACAAAAAATTAGTGGAGGGTAAAATTGTTCTGTGTGATAGCAGAAGCAAAGCGACAGGCCCTTTCGATGCCGGTTCTGTTGGGGCATTGATACAAGGTCAAAGTTTTAGAGATCTTCCTCCTACTCTTCCATTACCAGGATCTTACCTCGAATTGAAGGATGGTGCCTCTGTACTTGACTACATAAACTCCACGAGGACTCCAACTGCAACCGTATTTAAGACTGATGTGACAGAAGATACAATAGCCCCTGTTGTGGCCTCTTTCTCTTCAAGGGGTCCAAACATTGTTACACCCGAAGTTCTCAAGCCGGATTTAGTGGCTCCTGGAGTTGCCATTTTAGCTAGTTGGTCTCCGGTTTCTACTCCTTCTGATGTTGACGGTGACAACAGAACATTAAACTTCAACATCATTTCCGGAACTTCAATGTCTTGTCCACATGTTTCTGGGGCAGCGGCATATGTGAAGTCATTCCACCCAACATGGTCTCCTGCTGCCATTCGTTCAGCTCTAATGACAACAGCCAAACAACTTAGTCCAAAGATTAACCTTTACGCAGAACTGTCATATGGGGCAGGCCAAATTGATCCTTCGAAGGCTGTGTACCCTGGTTTAGTATATGATGCTGATGAAATAGACTATGTAAGGTTCTTATGTGGACAAGGGTATAGTACAAGGAATTTACAACTGATCACAGGAGATAACAGTAGCTGCTCCGAAGCAAGTTCAGCAAGGGATCTAAACTATGCCTCATTTGCACTTTTTTCCCCAATCTCCAAGTCGAAAAGAGTAAGTGGGAGTTTTAACAGGACTGTTACAAATGTTGGGTCAGCAACGTCGACGTATAAAGCTAAGGTGATTGGTCCTACAGGACTAAAAATTGAAGCGAACCCGAGTATTTTGACATTCACTTCTCTTAACCAAAAGCTCTCATTTGTGCTCACCATTGAGGGAACAATAAAGGAACCTATAGTATCAGCCTCTTTGACTTGGGATGATGGTAAATTCCAAGTGAGGAGCCCCATTGTTGTGTTTAACACAGTATAA 2118 0.4363 MQSYIVYTGNSMKDEDSALALYSNILQEVADSNAEPKSVQQHYKRSFGGFVAKLTEEEANRLARHERVVAVFPNQKKQLHTTRSWDFIGFPLNVDRAKTESDVIIGVLDSGIWPESKSFSDEGFGPPPSKWKGTCQSSKNFTCNNKIIGAKIYKADGFFTDDDPKSPLDVDGHGTHTASIAAGNPVSQASMLGLAQGTARGGAIKARIAVYKVCWLFDGCSDADILAAFDDAIADGVDIISVSLGGFSDENYFRDGIGIGAFHAVSKGVLTVTSAGNNGPKYSSLSNFLPWSITVAATTIDRKFVTKVGLGNNITYEGTSINTFDLKGVLYPIIYGGDAPSKGSDSSSSRFCFIGSLDKKLVEGKIVLCDSRSKATGPFDAGSVGALIQGQSFRDLPPTLPLPGSYLELKDGASVLDYINSTRTPTATVFKTDVTEDTIAPVVASFSSRGPNIVTPEVLKPDLVAPGVAILASWSPVSTPSDVDGDNRTLNFNIISGTSMSCPHVSGAAAYVKSFHPTWSPAAIRSALMTTAKQLSPKINLYAELSYGAGQIDPSKAVYPGLVYDADEIDYVRFLCGQGYSTRNLQLITGDNSSCSEASSARDLNYASFALFSPISKSKRVSGSFNRTVTNVGSATSTYKAKVIGPTGLKIEANPSILTFTSLNQKLSFVLTIEGTIKEPIVSASLTWDDGKFQVRSPIVVFNTV 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01783 705 Pfam Fibronectin type-III domain 603 701 IPR041469 -
Vimu6g01783 705 Pfam Peptidase inhibitor I9 3 80 IPR010259 -
Vimu6g01783 705 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 80 IPR037045 -
Vimu6g01783 705 Gene3D Peptidase S8/S53 domain 102 571 IPR036852 GO:0004252|GO:0006508
Vimu6g01783 705 CDD Peptidases_S8_3 77 532 IPR034197 -
Vimu6g01783 705 ProSiteProfiles Serine proteases, subtilase domain profile. 84 558 - -
Vimu6g01783 705 Pfam Subtilase family 101 539 IPR000209 GO:0006508|GO:0008236
Vimu6g01783 705 Gene3D - 575 703 - -
Vimu6g01783 705 Gene3D - 301 436 - -
Vimu6g01783 705 SUPERFAMILY Subtilisin-like 79 562 IPR036852 GO:0004252|GO:0006508
Vimu6g01783 705 CDD PA_subtilisin_like 308 429 - -
Vimu6g01783 705 PRINTS Subtilisin serine protease family (S8) signature 496 512 IPR015500 -
Vimu6g01783 705 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Vimu6g01783 705 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Vimu6g01783 705 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 701 IPR045051 -
Vimu6g01783 705 FunFam Subtilisin-like protease SBT1.5 102 313 - -
Vimu6g01783 705 ProSitePatterns Serine proteases, subtilase family, serine active site. 497 507 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01783 Vimu-Chr6 16168259 16172229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01783 2 702 Subtilisin-like Serine Gene Family AT3G46850 49.096 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01783 - - gmx:100795826 1153.66