Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01755 ATGTCCCTCCAGGCTCCCGGATTTTCGTCGGGATTCCATCCTCACCTCCAATATTCTGCTTCGGCTGCCAAAAGCTTCGGCCGTGAGTCAATTCAGAAGCTGAAAGCCGTAGTGAATAATGGTGAGAAAATTTGTTGGTTGGAGAATGTTGAGTTGATGGGAAAGCTGAGCCACGATACAAAAGTGAAAACGACGGAGATTTCATCGTTTCAATCGTTGTGTGCGCTGATGTGGCGGTCCGTTACAAAGGCGAGGAATCTGGAAGGGAGTAAAGTGACGACGTTTCGAATGGCAGTCAATGTTCGGCATCGAATGGAGCCCAAGTTGGGAGACCATTACTTTGGGAACGCGATTCAGAGCATTGCCACGTGTGCAGAAGCGGGTGACGTGGTGTCTAGCGAACTTGGATGGTGCGCGGAGCAACTGAACAAAAGCGTAAAGGCTTTCGACAGTGCCACAGTGTGCCGCAACGTGGAGAATTGGGAGCGTGAGCCAAAGTGCTTCGAGTTGGGGAACCACGATGGCGCCACTTTGCAGATGGGAAGCTCGCCCAGATTTCCGATGTACGACAATGATTTTGGATGGGGGCGGCCCCTCGCTGTGCGGAGCGGAGGAGCCAACAAGTTTGATGGCAAAATGTCGGCGTTTCCAGGTAGGAATGGCGGTGGTAGCATTGATTTGGAGGTGGTTTTGGCGCCTCATACCATGGACAAACTTCTCTCTGATCCCGAGTTCATGTCATATGTCTCCGGTTAG 756 0.5185 MSLQAPGFSSGFHPHLQYSASAAKSFGRESIQKLKAVVNNGEKICWLENVELMGKLSHDTKVKTTEISSFQSLCALMWRSVTKARNLEGSKVTTFRMAVNVRHRMEPKLGDHYFGNAIQSIATCAEAGDVVSSELGWCAEQLNKSVKAFDSATVCRNVENWEREPKCFELGNHDGATLQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKMSAFPGRNGGGSIDLEVVLAPHTMDKLLSDPEFMSYVSG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01755 251 Gene3D - 20 242 IPR023213 -
Vimu6g01755 251 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 25 247 - -
Vimu6g01755 251 Pfam Transferase family 18 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01755 Vimu-Chr6 15946293 15947432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01755 64 231 Monolignol Biosynthesis Gene Families AT5G48930 31.977 4.49e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01755 - - gmx:100799704 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01755 6 15946293 15947432 Vimu1g00938 1 6570092 6571552 PCT