Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01751 ATGGAAGAGGGCATGTCAGATTTTTGTTTTAGAGGTGAAAATGTTGGTGGTAACAGAGGTAGTGCCACTGGCACCAAGTGTGGGCGTTGGAATCCCACAACTGAACAGGCTATGGTTCTGACTCAACTCTTCAGTTCTGGACTCCGCACCCCAAGCACTGATCAGATTCAAAAGATCTCTAACCAGCTTAGTTTTTATGGTAAGATTGAGAGCAAAAATGTCTTCTATTGGTTTCAGAACCATAAGGCTAGGGAAAGACAAAAGCGTCGCAAGGTTGATAAGGATGTCATTCGTAGTGAAAACTCCATCGCCATGAACTTTTTCACGCAAAATTTTACGCAGCAAATTTATGACGATTCTGAGCCTGAGAAAGTGACTGAGACTCTTCAACTATTCCCCTTGAACTCTTTCGGTGAATCAGAATCAAAGAATATGAAGGTTCATGCAAGTGACTGCAGGGATAATACAATGTTTACATACACAGAGGAAGAACAAATGAACCATCCACCATTAGATCTTCGCTTGAGTTTTATGTGA 537 0.4153 MEEGMSDFCFRGENVGGNRGSATGTKCGRWNPTTEQAMVLTQLFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVDKDVIRSENSIAMNFFTQNFTQQIYDDSEPEKVTETLQLFPLNSFGESESKNMKVHASDCRDNTMFTYTEEEQMNHPPLDLRLSFM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01751 178 FunFam WUSCHEL-related homeobox 11 26 94 - -
Vimu6g01751 178 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Vimu6g01751 178 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 16 99 IPR044555 GO:0003700|GO:0099402
Vimu6g01751 178 SUPERFAMILY Homeodomain-like 28 90 IPR009057 -
Vimu6g01751 178 CDD homeodomain 29 89 IPR001356 GO:0003677
Vimu6g01751 178 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Vimu6g01751 178 Gene3D - 26 93 - -
Vimu6g01751 178 SMART HOX_1 25 92 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01751 Vimu-Chr6 15923798 15924442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01751 8 178 Wox Gene Family AT3G11260 52.660 1.98e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vimu6g01751 Homeodomain 9.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01751 - - gmx:100791433 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01751 6 15923798 15924442 Vimu1g00936 1 6556748 6557752 ECH
Vimu6g01751 6 15923798 15924442 Vimu6g01751 6 15923798 15924442 ECH
Vimu6g01751 6 15923798 15924442 Vimu1g00936 1 6556748 6557752 PCT