Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01737 ATGGCCTCCATCGCCGCCACCACATCATACTTCTTCGGCACCCGTCTCTACAGCCCAACAACCTTAAACACCGGAAGGTTCCACGCGTTCTTCAACTTCGGCACCAAGAAGGCGCCCCCGCCACCGAAGAAAAAGGAAGTCAAAGTGAAACCCTCCTCCGGCGATCGCCTGGTGTGGTTCCCGAATGCAGAGCCACCGGAGTGGCTCGACGGAAGCCTGATCGGCGACCGCGGGTTCGATCCGTTGGGGTTCTCAAAGCCCGCGGAGTACCTGCAGTTTGACCTGGACTCACTGGATCAAAACCTCGCGAAGAACGTCGCCGGCGAAATCATCGGAACAAGGGTGGAGGTTGCAGAGGTCAAACCGACGCCGTTTCAGCCGTACACGGAGGTTTTCGGGATTCAGAGGTTCCGCGAGTGCGAAGTCATTCACGGAAGGTGGGCAATGCTGGGTGCTCTCGGTGCTTTGGCCGTTGAGGCTCTCACTGGAGTCGCATGGCAAGACGCCGGAAAGGTAGAACTGGTGGAAGGATCATCTTACCTGGGCCTTCCACTTCCGTTTTCATTGACAACACTGATATGGATCGAGGTGATAGTGATAGGATACATAGAGTTTCAAAGAAACGCAGAACTTGACCCAGAGAAAAGGTTGTACCCTGGAGGCAAGTTCTTCGATCCTTTGGGTTTGGCCAACGACCCTGAAGAAAAAGCCAGACTTCAACTTGCAGAGATCAAGCATTCCCGCTTGGCCATGGTCGTCTTCCTCATCTTTGCCATTCAAGCTGCTGTCACTGGAAAAGGTCCTATCAGTTTTATTGCTACCTTCAACAAGTGA 834 0.5384 MASIAATTSYFFGTRLYSPTTLNTGRFHAFFNFGTKKAPPPPKKKEVKVKPSSGDRLVWFPNAEPPEWLDGSLIGDRGFDPLGFSKPAEYLQFDLDSLDQNLAKNVAGEIIGTRVEVAEVKPTPFQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFIATFNK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01737 277 SUPERFAMILY Chlorophyll a-b binding protein 54 274 - -
Vimu6g01737 277 Pfam Chlorophyll A-B binding protein 65 261 IPR022796 -
Vimu6g01737 277 Gene3D Chlorophyll a/b binding protein domain 58 277 - -
Vimu6g01737 277 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 37 273 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01737 Vimu-Chr6 15823695 15825161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01737 12 274 Chloroplast and Mitochondria Gene Families AT3G08940 72.243 2.44e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01737 K08915 - gmx:100820335 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01737 6 15823695 15825161 Vimu6g01737 6 15823695 15825161 ECH