Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01734 ATGTGTGTTGCTGAGTCAACTCAGCGATGGCTCGGACGAGTTTGGCTGGTTGACTCACCACATAATGTACCTTATGGGGACTGTGATGATGTGCGTGATGGAAATGGGTGTGGTGACTCAGATTCCATGGTTCGGTACAATGTGTCCAATTTTCTTGCACATGAGGCTTTGTATCAGAAGGTGAGCATGCACATGTATGAAGATGTTTGTATGAATGATAGAAGACATGTGGAAAGGGAAGGGGTTATAACGTTTGAGCTAACAGTGAAGCAATTGATGAGCTTTGACCCTGATGAATGGACTGAGAGTTTAAGGAAAGAGTATGTTCTTGTCATTGAAGGCTTCTTCACTCTCCCTTTACCTCTCTTCTCCACCACATACCGGAGAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCACTGACGTTGGTAGTGAGGCAGAGGAGAGAAGAGTATAACCAAGGGAAAGAGAAAAAGAGTGACATGCTAGGGGCACTGTTGGCCTCCGGTGACCACTTTTCCGACGACCAAATAGTCGATTTCTTGTTGGCTTTGCTCGTCGCCGGTTACGAGACCACCTCTACCATAATGACTCTTGCAGTCAAGTTCCTCACTGAGACTCCTCTGGCTCTGGCACAGCTCAAGCAACCCCACCACCCTGTCTGTGTCCATGACCACCGCCACTCCACCGTGTGTGGTGTGCTTCCGTTGGAACCTCTTAAAGCCTGGGTCTTTCAAACTTTCACCGTAAACAGAAAAGAGGGTGGTTTGGGAGGTTTTGGTGGTCAGATTGAGATGGTGATCTATCCAAGACGGAAAGGCCCTTGTCACCGTGCGTCTGCTTCTGCTTCTGCATCTGCATCATCTGCTGCACTCTGCAGAAAGTACTTTTTGTGTTTGCAGAACTTGTTTTGCCGTGGACTTATCTCCTTGGACCTCTCGGTCCCATGCTCATGTCTGGGAATTCGTGAAGAGCATGACCAAATCAGAGCAAGGAGTGACCCCGGGGCTCCACTGGAATGGACAGATTACAAGTCAATGGTTTTTACCCAACATGTTGTGAATGAGACCTTGAGGGTGGCAAACATAATTGGTGGGATATTTAGAAGAGCAACGACAGACATCGACATAAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTTCGTGCTGTACATCTGAATCCTGAATATTACAAAGATGCACGCACCTTCAACCCCTGGAGATGGCAGAGTAACTCATCGGAAGCAGCAAACCCTGCAAATGTTTATACACCTTTTGGTGGAGGGCCACGGTTGTGTCCTGGTTATGAGCTAGCCAGAGTTGTACTTTCTGTCTTCCTTCACCGCATTGTCACCCGCTTCAGCTGGGTTCCTGCTGAGGAAGATAAGTTGGTGTTTTTCCCAACAACCAGGACGCAGAAGAGGTACCCTATTATTGTCAAGCGTAGAAATGCAAACCATGTATAG 1479 0.4767 MCVAESTQRWLGRVWLVDSPHNVPYGDCDDVRDGNGCGDSDSMVRYNVSNFLAHEALYQKVSMHMYEDVCMNDRRHVEREGVITFELTVKQLMSFDPDEWTESLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLVVRQRREEYNQGKEKKSDMLGALLASGDHFSDDQIVDFLLALLVAGYETTSTIMTLAVKFLTETPLALAQLKQPHHPVCVHDHRHSTVCGVLPLEPLKAWVFQTFTVNRKEGGLGGFGGQIEMVIYPRRKGPCHRASASASASASSAALCRKYFLCLQNLFCRGLISLDLSVPCSCLGIREEHDQIRARSDPGAPLEWTDYKSMVFTQHVVNETLRVANIIGGIFRRATTDIDIKGYTIPKGWKVFASFRAVHLNPEYYKDARTFNPWRWQSNSSEAANPANVYTPFGGGPRLCPGYELARVVLSVFLHRIVTRFSWVPAEEDKLVFFPTTRTQKRYPIIVKRRNANHV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01734 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vimu6g01734 492 PANTHER CYTOCHROME P450 26 83 218 - -
Vimu6g01734 492 SUPERFAMILY Cytochrome P450 93 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 Pfam Cytochrome P450 322 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 Pfam Cytochrome P450 116 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 PRINTS P450 superfamily signature 188 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 Gene3D Cytochrome P450 49 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 Gene3D Cytochrome P450 321 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 PRINTS E-class P450 group I signature 177 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01734 492 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01734 Vimu-Chr6 15800503 15804849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01734 316 488 Cytochrome P450 AT5G05690 75.723 7.53e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01734 K09588 - gmx:100789842 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01734 6 15800503 15804849 Vimu6g01734 6 15800503 15804849 ECH
Vimu6g01734 6 15800503 15804849 Vimu1g00918 1 6391550 6396175 PCT