Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01729 ATGATTGATCCAGGAACGGTAGATCAATACTTAAAACGACGCGTTACTACAGGATGTTACGACGTAGATGTCTCAAATGCCAACGACATATGGAAAAGTGAAACCGTCCTGTTCTTTTACCTTCCTACCTTGGCAGCCCAAGTTGCTTTCATGTTGTTATCCACTCGTTTTTTGTACTATATCCTCAAACCCTTAAACCAACCACGTCTTGTTTCTGAGATTTTGGCAAGTGCATCATCTACTCCTCAGTTTGCTTCTTTCAATGCTCGTATTATGGGTATTCTGATAAGTCCAGAACTATTTGGATCATCAGCTTTATCTGAGGTTCTCACCCCTTTGAAGTCAATCCTAACAACTGAAACGATATCATACGTGGGACTCATTTACACTGTCTTCCTGGCTGGTTTGGACATGAATTTTGACACAATCCTACGAGGAAGAAAGAAGGCCACAAGCATTGCCATTGCTGGCGTTTTGATTCCAATGCTGTGTGGGGGTATCATATATGCTTTGGCTCTAAAAATGTACAAGGGACCTCCAGAGTATTGGGCAAATTACGACAATCCAAAGGCTTATATGTTTTGGACCTTAATTTTGAGTGTCACAGGTTTTCCTATGGTTAGTCACATTCTTGCAGATCTCAAGCTCCTCTACACGGGACTTGGCAGAGTGACCTTAACAACAGCCATGATCAGTGACTTCTATAACTGGGTCATGTTTGCAATGTTGGTTCCATTTGCCATAAACGGTGGAAGTGCCATCTACGCCGTGCTGAGCACTATAGTTTATGTGTTTTTCTGCTTCGTTGTTATTCGTCCTTATTTGGTGGAGATAATAGTTCGCAAAACCAATCAGAATGAGTGGAACAATAATGGGTTGTTAATTGTGGTCATGGGAGCATATGCTTCTGCAGCGGTTACGGATCTGCTAGGGACACACCCTGTTGTTGGGGCTCTGGTTTATGGAATCATGATACCTCGTGGTAAATTTACCCACTTGCTCATAGAGAAGTCAGAGGATTTTGGAGTTGTTTATCTGGCTCCATTGTTCTTTGGTAGCTGTGGCATAAGGCTCAGAGCAATATATGTCATAAAAACTCAGGGTTTGGGCCTGGTGCTGTTGATTTTGCTCCTCTCAATCCTTCCGAAGATTTTAAGCACTGTAATAGCCACTCAGTTTTATGGTATGCCTGTTCTTGATGGTGTGTCTATTGGACTGCTAATGAACACCAAAGGCATCCTACCGATATTAATGCTCAACAGTGCCTGGGACAAACAGATTTTGAGTGTGGAGTCCTTCTCAATTTTGACAATAGCTGTTCTAGTAATGACCATGATGGTGCCTCTTATCATCAATGCTATATACAAGCCAAGAAAGCTATACAAACAAAATAAACTTAAGACCCTACAAAACTTAAAGGCCGAAGCAGAGCTGCGTATATTAGCTTGTGTCCACAACCCTCGGCAAGCGACAGGAATGATCAACATCCTTGAAGCATGCCACAGCACAAAACTTCCCCCTCTACGTGTGTTTGCACTTCAGCTTGTTGAACTAACTGGACACACCGCTTCCCTTTTTGTTTCCCATGTCAATCAGAACAACCAACAGCAAAGCGGTGGTGAACAAGCCCTCACCAAAGCACAGCAAGACTTGGAGAGCATCACAAACATTTTTCAAACATACGCAGCAATAAATGAGAACAGTAAAGTGGAGACCATTGCAGCTGCATCCTCCTATTCAACCATTCACGAGGACATATACAACTTGTCACAGGAGAAACATGCCAACCTGATTCTCCTTCCTTACCACAAACAATCAAACATAGAAGGCATTCTAGAGACAGCCAACACTGCATTCCAAGAAATAAACCGCAATGTGATGAGAGATGCACCATGTACTGTGGGAATCTTTGTTGACCGTGGACTTGCCTCATTGTTCAAAGTGAACTTGCGTGTGGTTATGGTTTATATCGGTGGTCCTGATGATCGTGAAGCCTTGGCTGTTGCATGGAGGATGTCAAAGCATCAAGGGGTGCAACTTTCTGTGGTGAGGATCCTCATGTTTGGTGAAGCTGCTGAGATTGATGTTATGTCACACGTTGAGAGTCATGGACTATTATCTGTGGTAGTAGACAGTGAGAAGCAAAGGGAGTTGGATGATGAGTATGTGAGTGCATTCAGACTGAAAGCAGTGAGCAATGAGGATTCTATAAAGTATTCAGAAAAAGAAGTTCGAAGTCGTGATGATATTCCTGAGGTGCTCCATGAGGTTGACCAAATTGGTTATGATTTGTATATTTTAGGACAAGGGGGAGGTAGGAACTGTTTGATATTGACGGAGTTGATGAAATGGACAGATTGTCCGGAACTTGGTGTCATAGGGGACACTGTGGCATCCAATAACTTTGGTTCAAGCTCTTCACTTCTTATTATACAGCAATATGGGTTTGGGGGAATGGTGTTTGAGAACAGTAATACCACACAGAAGCCTAATGTTGTAGTACCATCAAACATTGAAGATGAGCCAGTTTTTGTGGAGGTAGAATGGCATCAATAA 2556 0.4264 MIDPGTVDQYLKRRVTTGCYDVDVSNANDIWKSETVLFFYLPTLAAQVAFMLLSTRFLYYILKPLNQPRLVSEILASASSTPQFASFNARIMGILISPELFGSSALSEVLTPLKSILTTETISYVGLIYTVFLAGLDMNFDTILRGRKKATSIAIAGVLIPMLCGGIIYALALKMYKGPPEYWANYDNPKAYMFWTLILSVTGFPMVSHILADLKLLYTGLGRVTLTTAMISDFYNWVMFAMLVPFAINGGSAIYAVLSTIVYVFFCFVVIRPYLVEIIVRKTNQNEWNNNGLLIVVMGAYASAAVTDLLGTHPVVGALVYGIMIPRGKFTHLLIEKSEDFGVVYLAPLFFGSCGIRLRAIYVIKTQGLGLVLLILLLSILPKILSTVIATQFYGMPVLDGVSIGLLMNTKGILPILMLNSAWDKQILSVESFSILTIAVLVMTMMVPLIINAIYKPRKLYKQNKLKTLQNLKAEAELRILACVHNPRQATGMINILEACHSTKLPPLRVFALQLVELTGHTASLFVSHVNQNNQQQSGGEQALTKAQQDLESITNIFQTYAAINENSKVETIAAASSYSTIHEDIYNLSQEKHANLILLPYHKQSNIEGILETANTAFQEINRNVMRDAPCTVGIFVDRGLASLFKVNLRVVMVYIGGPDDREALAVAWRMSKHQGVQLSVVRILMFGEAAEIDVMSHVESHGLLSVVVDSEKQRELDDEYVSAFRLKAVSNEDSIKYSEKEVRSRDDIPEVLHEVDQIGYDLYILGQGGGRNCLILTELMKWTDCPELGVIGDTVASNNFGSSSSLLIIQQYGFGGMVFENSNTTQKPNVVVPSNIEDEPVFVEVEWHQ 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01729 851 Gene3D - 43 464 IPR038770 -
Vimu6g01729 851 Pfam Sodium/hydrogen exchanger family 90 453 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu6g01729 851 Gene3D - 508 788 - -
Vimu6g01729 851 PANTHER CATION/H + ANTIPORTER 22 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01729 Vimu-Chr6 15766415 15769603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01729 19 814 Antiporter Super Family AT2G13620 35.767 3.40e-172 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01729 - - vun:114191181 1498.8