Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01726 ATGAATTGTGCCAAAGCTACTCAGAAGCTTGTATTAAGCTATGCAAGGAACTGGATGTCAAAGTTGTTGATCTTTTTAATGCATTACAGAAGAGAGATGACCGGAGGAATGCTTGTTTTACCTGAGGGAAGCAAAATAGTGGTGAAAGATATACTGAGCGTGCTTAAGGAGGCTGACTGGGAGCCATGCCTCCACTGGAAATTTTTGTCCACTGAATTTGCAGAAGAGACACCATATGATCTGGTTGCTGCTGATGGCAGAACTACATTGAATTCTGAGTGGACTTTTTACAGAGAGACTCATAACCCCAATCAGCACTCCGCAGTAGCTATCGTCGCGGCTCACTCTGTCAGTAGCTTGCGGCGGCACGATTCACTCCGTCATAGCTCAGTTATTATTCCCCCCTATCAGTATGATACTCATATTTCAATATTTCGTGGTTATGAATTTCTTTTAAATGGAAGTGCAACAACAGATACTTGCGGAAGCAGCAGGCAGGAGGATATGAATACTAAGTACTATGATATTGATGATATTATTATGGAGGAAGAGACCGTGTCAGTTATATTTCAGAAGACTGCATCTGGAGTGGGAATAGATCCCAGTTCTGAAAAGGACTTTATTGAAACTGGTTCAAAAGTTGAATTGCCCTTTTGGCTTGCTCATGAGTTACAGATGAGACAGGCAGTATCAGTCAACATTCCCTCTTGTTTTGATAAAACAACAAGGCTAGAGATCCAAGCTGATTCGGCCGGTGTGGATCTGAGGTCCAGATGTCCATTCTTTTATGAGTTTGGTTGCAAGATAGCACCCATAGTTGGCGACCGAACCATTGGGTTTCTGTTGTTGTCTGCTTTTAAGAGTAGGTACAAGGAAATTCTCACTAAGGCCCATTCTGTAGCATTTGCTGCTGGTTCCAAATTTTGGTCTATTCTGACAAAAGAAGAGATCAACTTGTATGAGACAGCTCAATCCGAAATGGCATCCTTCAAAAAGTGGCGAATGGGAGGGCCCAGATTTCAGATAGCTTCTGTTCTGGGAAAAAAGAGAAAACCCACTGAATAG 1065 0.4244 MNCAKATQKLVLSYARNWMSKLLIFLMHYRREMTGGMLVLPEGSKIVVKDILSVLKEADWEPCLHWKFLSTEFAEETPYDLVAADGRTTLNSEWTFYRETHNPNQHSAVAIVAAHSVSSLRRHDSLRHSSVIIPPYQYDTHISIFRGYEFLLNGSATTDTCGSSRQEDMNTKYYDIDDIIMEEETVSVIFQKTASGVGIDPSSEKDFIETGSKVELPFWLAHELQMRQAVSVNIPSCFDKTTRLEIQADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSRYKEILTKAHSVAFAAGSKFWSILTKEEINLYETAQSEMASFKKWRMGGPRFQIASVLGKKRKPTE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01726 354 Gene3D - 159 336 IPR038437 -
Vimu6g01726 354 SUPERFAMILY PriA/YqbF domain 165 235 - -
Vimu6g01726 354 Pfam GINS complex protein 214 317 IPR021151 -
Vimu6g01726 354 CDD GINS_B_Psf3 173 235 - -
Vimu6g01726 354 PANTHER UNCHARACTERIZED 169 353 IPR010492 -
Vimu6g01726 354 CDD GINS_A_psf3 230 336 - -
Vimu6g01726 354 SUPERFAMILY GINS helical bundle-like 234 335 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01726 Vimu-Chr6 15738223 15748795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01726 172 351 Core DNA Replication Machinery Family AT3G55490 67.778 1.88e-90 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01726 K10734 - gmx:100799874 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01726 6 15738223 15748795 Vimu6g01726 6 15738223 15748795 ECH