Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01683 ATGGAGAATCCAAAAGCAGGCAATGACACCAGTTATTGGGATTCGCAAGGGGAGTGGCATGTTTGTGTACGAAACGATAGAAACTTAGGGTCTTATGGCGTTTTCATTGAGGATAATCCATTTGGGTTTGTGCTTCCAGTGACGTTGTGCCAACTCTTCACCTTCAACATAATCTCTAGAATGCTGTACTTTCTTCTGAGGCCTCTACGAACACCCAAATTCATCTGCAACCTTCTGGGTGGGATTGTTTTGGGCCCGACATTTCTGGGCCGCTGTAAGGCGTATAGGAGTGCTCTATTCCCAGAAAGACAAGCAATGGTGCGATTGTTTGCATCCGTATTAGGAGCCATATATTTCCTGTTCTTAGTGTCACTGAAAATGGACGTACTCATGACTGTGAGAGCCGCAAAAAGCACGTGGCGACTCGGAGTAATACCCGTATTCGTTTCATTTATAGCCCTCAACACACTCTTAAGCGTCTTCTATGCCCCTAAAATATCTCCTTCATACATAGACGTTTCAAGAGTCTCAATAAGCTTTGTAATGGCCCTCAGCAACTTCCCCGTCATCTCTGATGCCTTGGTCGAACTCAATCTCATAGCCACAGAGCTTGGCCAGATCTCTCTCTCTTCCTCCATGATCAACGACAACATACAATGGCTATTGATCATCGTCCACAGCTTCGCCGACGAAGCTGACCTCAAAGATTCAATCAACTTGTTGGGAAAGTGGTCCCTATTCATTTGTTTAATTTATTTCGTCCTGCGTCCCACCATGAAGCTCATTGTAAGGATAACCCCGGTGGGGAAACCGGTGAAGGAGACCTACGTTGTCTTCATTCTTCTCACAGTTCTGCTGGTGTCGGTTTTGGGAGACGTGATGGGAGTAAGCGTTCTGGTGGGGCCGTTGCTTTTGGGGTTGGTGATACCGAGTGGACCACCCTTGGGCACAACACTTGTGGAGAAGAGTGAGATTCTCATCACCCAGTTTATGCTACCCTTCTTCTTCATGTACGTGGGAATGATGACCGATTTGTCTGCCCTCAGGGATTGGCGGTTGTTCTTGACTCTGCAGACTGTGTTCATCGTGGGAGACTTGGCCAAGTTGGTGGCATGTATTTTGGTTTCTATAACGTACAACATTAAGCCTAGATATGGCACGTTGCTTGGCCTCACCTTGAACATCAAGGGACTAACTCAACTCATAGGTTTCGCTAGACTCAAGAAAATCAAGATGTTGGATGAGGACACATTCAGTCAACTGGTGTTCTGTGTGGTGGTTATCACCATGATCGTTACACCCTTGATCGGCTTACTGTACAGGCATCGGCCTCGAGTCCTACAGACAGCAAGCTTATACGAAGGCTGTGCCAGATCCATCCAAAGCATTCCAAGAGATGCAGAGTTTCGCATCATTTGTTGCGTACACAACGAAGAGAATGTGCGTTGCGCCACTGCTTTCATCGAAGTGTGCAACCCTGTGTTAGAGAGCCCCATATGCCTCTACGCTATACACCTAATCGAGCTTCTAGGAAAAAGCGCACCCATTCTCATTCCCATAAACTACAGACTGAAATCTTTGTCCGTTAATTATCGCAACACCAACCACATCATGCGAGCCTTCGAAAACTACTCTGACAACTCAAGTGGACCCGTCACGGTTATCCCCTACGTCAACGTCGCACCCTACAAGAGCATGCACGATGCCATTTGCAACCTCGCCCAAGACAAGTTGGTGCCTTTCATCATCATCCCCTTCCCCGAAAACGACAACGTTCATCTCGTGAACCACGTGGCAGCATCCATCCGAAAAATGACCGCCAGCTTTCAAGCGCAAACTCCATGCACGTTGGGAATTCTCGTGGACAAGCACTCCCGGCTGAGCGCGTGCAACGTCGACATGTTTTTCAACGTGGGAATATTCTTTATAGGTGGGGCCGACGACAGAGAAGCGTTGGCTTTGGGGATTCGGATGGGGGAGCGTGCGACAACGAGGGTGTCGTTGTTCCGGTTCGTGGTGAGGAATAGAGAGTACGGGAATAAAATAGTTTTGACGAGAGAGGAGCGTGAACAGGAAGAGGAGGATCTGATGATGGACGAGGGGTTAATTGATGAGTTCAAGAGCCTCAAATATGGCAGCGGTAACGTTTCTTGGTTCGAGATTACGGTGGAAGATGGGGTTGAGGTGTTGGACGCAGTTCATAGTTTGGAAGGAAACTATGACCTTGTGATGGTCGGAAAAAGACACAATGATGGGTATCTGAGTTCAGACCAATTGGAAACACTCATAGAAAATGCAGCCATTTTGGGAATATTGGGGGACATGCTGTCGTCGCCGGAGTTTTGCCTTGGGATGATTCCGGTTCTGGTCACACAGTGTGGAGAGGCCGGAGTTCTGTTGGGGCCAACATGCTTTGGGTACGACGAAGCTTTCCTTGGGACTTTGTTTCCGCTAAAACAAGCTTTGGTTATGAATACGTTGGCCAAAATAGGCACAATTTACTGCGTCTTCCTAACAAGTCTGAAAATGGATGTATTGACAACATTAAAAGGAGCGAAACGATGTTGGCGATTCGGCGTGCTTCCCTTCTTCGCTTCCTTCTTCGTCACGGCGACTATGCTGTCTTTGTATTCGCCCCATGGCGCTGACAGAGACAAAGACATAATGTCGATGTACAACTTCCCCAACATCTTCACCCTGAGCAGTTTCGCTGTTATATCAGAAATCCTCATGGAACTGAACCTCTTGGCCACGGAATTGGGCAGAATCGCTTTGTCTTCTGCCATGATCAGCGAGATATTGCAATGGTCTACGATGGAGCTCCAGTTCAACACAAACTTGAGCGCTGGATTTATAGTTGTGTTATTGGCAGGTGCATTCGGGTTCGGTCTGTTGTGTGTTGCTATCGTGAGACCACTGGTGAACATTATTGTTGAAAAAACACTACCCGGAGAACCAATGAAAGAAACATACGTTGTTGCTCTACTTCTGGGGCCACTTGTTATGGCAGCCATTAGTGACAGCTTGGGGATATTCTTCATTGCGGGACCTCTTCTCTATGGTTTTATTCTGCCCAATGGACCCCCAGTGGCTACAACAATTATAGAGAGGGTTGAATTGATAGTCTCTGAGTTTTTTATGCCTTTCTTCTACATGTATGTAGGCAAAAGAACAGATTTGTCTGGACTTCATGAACATTGGGAGGTGGCTCTAACAGTTCAGGGAATCTTATTTTTGGGATGCGTGGTAAAGGTGCTTGCATGTGCACTTATTTCTCCCGCCTATAAAATTAAGCCCAAACATGGCGTTGTGCTTGGGCTCATATTGAACGTCAAGGGTGTAGTGGAACTCATTTTCTACAGTAGAATGAACAAACTCGGGGTAATTGATACAGAAGTATACAGTGTAGCGGTGATGTGCGTGGTGTTAATCACAGCACTCTGCGTACCCTCGATCAAAATCTTGTACAGGCACTGTCGCGTCTGCATAACACCAACAGTACAAGAAGGTCGTGTGAGAACAATCCAAAACTGCAAACCAAACACGGAGTTCAACATTGTTTCGTGCGTGCACACGGATCAACACGTGCATAGCATGATTGCCCTAACAGAGGCATGCAACCCAACCCTAGAAAGCCCCATTTGCCTCTTCGCGATCCATCTCATTGAGCTCTCCGGCAAAAGCACACCCATTCTTCTTCCCATGAACAAGAACAACAGAAAATCTTTGTCCGTCAACTACCCCAACACCAACCGCATTTTACGTGCATACGAGAATTACTCCGAAAACTCAACTGGCCCTGTAACTGTTCTTTCGTACGTCAACGTTGCGCCGTACAAAAGCATGCACGAAGCAGTTTGTAACCTCGCGGAAGATTATTCGGTGCATCTGCTCATTATTCCATTTCATCAAAATGATCAGAGTCTGGGAATCCATGTATGCAGCATCTTCCGTGAGGTGAACGAAAATTTTGCTGCTAACTCAAAGGGAACGTTGGGGATTCTTGTGGATAGATTCTCGGTGCTGAGTATGAGAAACTACAAGATGCCTTTTCATGTGGGTATCTTCTTCGTGGGTGGAGAAGACGATAGAGAAGCATTGGCGTTGGGAATTCGAATGTTGGAACGCGCCAACACCCGCGTGACCTTGATCCGGTTTGTTTTGCTTAGGAAAGGAGATTCGGGGTTTTTGATATATGGAGACGTGCAAAATGAAGAGGATACGTTAGAGAGCACGTTGAACGAGAGTTTAATAGATGAGTTTTTGGCGAAGAAGGATTATAGTTTTGATGTTGTTAACGTTGTTTATCATGAAGTTATGGTGGAAGATTGCATACAAGTTTTGGAAGCTATTAGGGTAATGGAGAAGGACTATGACCTAGTGATGGTGGGGAAGCAACATAATATGGGGGATTTTAGGGAAGAAGAAATGTCAAATTTAATGGACAATTCGGATCAGTTGGGAATTTTGGGGGATATGTTGTCATCCAGTGAGTTTTGTGAAGGAAAAACTCCTGTGCTGGTCATGAAATCTGGAATCAAAAGGGTTAAACAATTAACAAATTCAGGTCGTAACATCTTTCTTAGTGCTTCTTAA 4596 0.4611 MENPKAGNDTSYWDSQGEWHVCVRNDRNLGSYGVFIEDNPFGFVLPVTLCQLFTFNIISRMLYFLLRPLRTPKFICNLLGGIVLGPTFLGRCKAYRSALFPERQAMVRLFASVLGAIYFLFLVSLKMDVLMTVRAAKSTWRLGVIPVFVSFIALNTLLSVFYAPKISPSYIDVSRVSISFVMALSNFPVISDALVELNLIATELGQISLSSSMINDNIQWLLIIVHSFADEADLKDSINLLGKWSLFICLIYFVLRPTMKLIVRITPVGKPVKETYVVFILLTVLLVSVLGDVMGVSVLVGPLLLGLVIPSGPPLGTTLVEKSEILITQFMLPFFFMYVGMMTDLSALRDWRLFLTLQTVFIVGDLAKLVACILVSITYNIKPRYGTLLGLTLNIKGLTQLIGFARLKKIKMLDEDTFSQLVFCVVVITMIVTPLIGLLYRHRPRVLQTASLYEGCARSIQSIPRDAEFRIICCVHNEENVRCATAFIEVCNPVLESPICLYAIHLIELLGKSAPILIPINYRLKSLSVNYRNTNHIMRAFENYSDNSSGPVTVIPYVNVAPYKSMHDAICNLAQDKLVPFIIIPFPENDNVHLVNHVAASIRKMTASFQAQTPCTLGILVDKHSRLSACNVDMFFNVGIFFIGGADDREALALGIRMGERATTRVSLFRFVVRNREYGNKIVLTREEREQEEEDLMMDEGLIDEFKSLKYGSGNVSWFEITVEDGVEVLDAVHSLEGNYDLVMVGKRHNDGYLSSDQLETLIENAAILGILGDMLSSPEFCLGMIPVLVTQCGEAGVLLGPTCFGYDEAFLGTLFPLKQALVMNTLAKIGTIYCVFLTSLKMDVLTTLKGAKRCWRFGVLPFFASFFVTATMLSLYSPHGADRDKDIMSMYNFPNIFTLSSFAVISEILMELNLLATELGRIALSSAMISEILQWSTMELQFNTNLSAGFIVVLLAGAFGFGLLCVAIVRPLVNIIVEKTLPGEPMKETYVVALLLGPLVMAAISDSLGIFFIAGPLLYGFILPNGPPVATTIIERVELIVSEFFMPFFYMYVGKRTDLSGLHEHWEVALTVQGILFLGCVVKVLACALISPAYKIKPKHGVVLGLILNVKGVVELIFYSRMNKLGVIDTEVYSVAVMCVVLITALCVPSIKILYRHCRVCITPTVQEGRVRTIQNCKPNTEFNIVSCVHTDQHVHSMIALTEACNPTLESPICLFAIHLIELSGKSTPILLPMNKNNRKSLSVNYPNTNRILRAYENYSENSTGPVTVLSYVNVAPYKSMHEAVCNLAEDYSVHLLIIPFHQNDQSLGIHVCSIFREVNENFAANSKGTLGILVDRFSVLSMRNYKMPFHVGIFFVGGEDDREALALGIRMLERANTRVTLIRFVLLRKGDSGFLIYGDVQNEEDTLESTLNESLIDEFLAKKDYSFDVVNVVYHEVMVEDCIQVLEAIRVMEKDYDLVMVGKQHNMGDFREEEMSNLMDNSDQLGILGDMLSSSEFCEGKTPVLVMKSGIKRVKQLTNSGRNIFLSAS 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01683 1531 Coils Coil 675 695 - -
Vimu6g01683 1531 FunFam Cation/H(+) antiporter 15 47 446 - -
Vimu6g01683 1531 Gene3D - 47 446 IPR038770 -
Vimu6g01683 1531 Gene3D - 780 1161 IPR038770 -
Vimu6g01683 1531 PANTHER CATION/H + ANTIPORTER 28 792 - -
Vimu6g01683 1531 Pfam Sodium/hydrogen exchanger family 796 1148 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu6g01683 1531 Pfam Sodium/hydrogen exchanger family 60 435 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01683 Vimu-Chr6 15437640 15446335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01683 33 792 Antiporter Super Family AT2G13620 32.020 1.70e-119 394